KEGG   Planktomarina temperata: RCA23_c21630
Entry
RCA23_c21630      CDS       T03229                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
ptp  Planktomarina temperata
Pathway
ptp00740  Riboflavin metabolism
ptp01100  Metabolic pathways
ptp01110  Biosynthesis of secondary metabolites
ptp01240  Biosynthesis of cofactors
ptp02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ptp00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    RCA23_c21630 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RCA23_c21630 (ribD)
Enzymes [BR:ptp01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     RCA23_c21630 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     RCA23_c21630 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AII87690
Position
complement(2313759..2314853)
AA seq 364 aa
MSAARDARFMALALSLGQRGQGCVWPNPAVGCVIVQGARIVGRGWTQPGGRPHAETMALA
QAGALSKRATVFVTLEPCAHHGATPPCAEALIAAGIARCVVAISDPDPRVSGKGIAKLQA
AGIEVSAGCQAQEALLAHRGFFSRLQNGRPRVTLKLATSLDGRIATASGESQWITGAEAR
RDVHGLRACHDAVLVGGGTARADNPSLTLRGLGLDRQPVRIVASRHLDFDAPALQASRDV
APLWLCHGPQARARGAWQNQCDALVQVPLAADGQLDLSVLMQALGEKGLTSVLCEGGGQL
AASLLRAGLVDDVILYTAGLALGADGLAGLGDLALSHLHTAPRFELISARKIGSDIRQDW
RRLS
NT seq 1095 nt   +upstreamnt  +downstreamnt
gtgagtgccgcacgcgacgcgcgctttatggcgttggccctgagtttgggccagcgcggt
caagggtgtgtttggcccaatccggcagtgggatgcgtcattgtccaaggcgcgcgcatt
gtcggtcgcggctggacccagccaggcggcagacctcatgcagaaaccatggctttggca
caggccggtgccttgtcgaagcgggccaccgtctttgtcaccctagagccctgtgcccat
catggcgccacgccgccctgtgctgaggccttgattgctgcagggattgcgcgctgcgtc
gtggcgatttcggacccagatccccgggtcagcggcaagggaattgctaagctccaagcg
gcgggaattgaggtcagcgctggctgccaagcgcaagaggctttgctggcgcatcgcgga
ttttttagccggttgcagaatgggcgaccgcgggtgacgttgaaattggccacatctttg
gatgggcgcattgccacggccagcggcgaaagccagtggatcaccggggctgaggcgcgg
cgcgatgtgcatggtttgcgtgcctgtcatgacgcggtattggtcggtggcggcacggcg
cgcgcggacaatccgagcctcaccctgcgcggtttgggcctcgatcggcagcccgtccgt
attgtggcctcacgtcatttggattttgatgcgccagctttgcaggccagtcgcgatgtt
gcgccgctctggctgtgtcatgggcctcaggcccgtgcgcgcggcgcttggcaaaatcag
tgcgacgcgctcgtgcaggttccactcgcagctgacgggcagcttgatttgtcagtgctc
atgcaggccttgggagaaaaggggctgacatcggtgttgtgtgagggcggcgggcaattg
gctgcctcattgctgcgggccggattggtcgatgatgtgatcctctatacggccggcttg
gcacttggggccgacgggctggccggtttgggcgatctggccctgtcgcatttgcatacg
gctccgcgctttgagctcatctcagcgcgcaaaattggctcagatatccgtcaagattgg
cgccgcctgtcttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (54)   

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