KEGG   Planktomarina temperata: RCA23_c30560
Entry
RCA23_c30560      CDS       T03229                                 
Symbol
rph
Name
(GenBank) ribonuclease PH
  KO
K00989  ribonuclease PH [EC:2.7.7.56]
Organism
ptp  Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:ptp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ptp03016]
    RCA23_c30560 (rph)
Enzymes [BR:ptp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.56  tRNA nucleotidyltransferase
     RCA23_c30560 (rph)
Transfer RNA biogenesis [BR:ptp03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    RCA23_c30560 (rph)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C Inv-AAD
Other DBs
NCBI-ProteinID: AII88556
Position
complement(3230502..3231212)
AA seq 236 aa
MRPSNRELNQMRDIVIETDVTRHAEGSCLIKIGDTHVLCTASLEERVPPFLRNSGLGWVT
AEYGMLPRATHTRMRREAKNGQSGRTQEIQRLIGRSLRAGVDRVALGERQISIDCDVIQA
DGGTRCAAITGGWVALKLAVQKLMKAGDIISDPLVDPVAAVSCGIYAGQAVLDLDYPEDS
EAGVDGNFVMLGSGKLVEVQMSAEGSTFSRDQMGQLIDLAEAGVSQLVAAQLAAVG
NT seq 711 nt   +upstreamnt  +downstreamnt
atgcgaccatccaatcgagaattaaatcaaatgcgtgacattgtgattgaaacagatgtc
acccgtcatgccgagggatcttgtttgatcaagattggcgatacgcatgtgctttgcaca
gccagtttggaagagcgcgtgcctccttttctgcggaactcaggattgggttgggtaaca
gcagaatatgggatgctgccccgcgccacccatacgcgcatgcgccgggaggccaaaaac
ggtcaatcggggcgcactcaagagattcaacgtctcatcgggcggagtttgcgcgccggt
gtggatcgggtggctctgggtgagcggcaaatcagtatcgattgcgatgtgatccaagca
gatggcgggacgcgttgcgccgcaatcacaggcggttgggtggcgcttaagctcgctgtg
caaaaactcatgaaagctggagatattatcagcgatccgcttgtggatcccgtggctgcg
gtgagctgtggaatctatgcgggccaagcggttttggatctggactacccggaggacagt
gaggctggggttgatggcaatttcgtgatgttgggatcgggcaaattggttgaagtccag
atgtcggcagagggctcaacattctctcgtgatcaaatgggacagctgattgatctggcc
gaggcaggcgtgtcgcaactggtggctgcgcaattggcggccgttggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (31)   

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