KEGG T03229: RCA23

Planktomarina temperata: RCA23_c30910

Entry

RCA23_c30910      CDS       T03229

Symbol

infB

Name

(GenBank) translation initiation factor IF-2

K02519

translation initiation factor IF-2

Organism

ptp Planktomarina temperata

Brite

KEGG Orthology (KO) [BR:ptp00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:ptp03012]
    RCA23_c30910 (infB)
   03029 Mitochondrial biogenesis [BR:ptp03029]
    RCA23_c30910 (infB)
Translation factors [BR:ptp03012]
Eukaryotic type
  Initiation factors
   MTIFs
    RCA23_c30910 (infB)
Prokaryotic type
   RCA23_c30910 (infB)
Mitochondrial biogenesis [BR:ptp03029]
Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial translation factors
    RCA23_c30910 (infB)

SSDB

Motif

Pfam:

IF-2 GTP_EFTU IF2_N MMR_HSR1 IF2_assoc GTP_EFTU_D2 Arf FeoB_N MMR_HSR1_Xtn Ras RsgA_GTPase PduV-EutP Roc MnmE_helical TAF4 SRPRB FAD_binding_5 Dynamin_N

Other DBs

NCBI-ProteinID:

AII88591

Position

3267775..3270240

AA seq 821 aa
MSDDGKKTLGLMGGSRSGNVKQSFSHGRTKNVVVETKRKRVVVPKPGAAKPAAPGAVRGG
DPARRPAGISDAEMERRLKAVQAAKARETEDAARRAQEDLEREAERNRRREEQETKEREL
REREERTQAKVAAEEQKKREAEAAALLAAAPPPTPEERAAKTGVVRNKVAEPVRREEPAR
PSRNKGREDNRRSGKLTVNQASAGNDGRHRSMASMKRKQERARQKAMGGTVEREKIIRDV
QVPDAIMVQELANRMAERVSDVVKSLMQMGMMVTQNQTIDQDTAELIVEEFGHKIVRVSD
ADVEDVIDQVVDSPEDLKPRAPIITVMGHVDHGKTSLLDAIRNARVVSGEAGGITQHIGA
YQVEQNGDLLTFLDTPGHAAFTSMRSRGAQVTDIVILVVAADDAVMPQTIEAIAHAKAAN
VPMIVAINKIDRPAADPQKVRTDLLQHEVIVEQMSGEVQDVEVSATTGQGLDQLLEAIAL
QSEILELKANPNRAASGAVIEAQLDVGRGPVATVLVQNGTLKLGDIFVVGEQWGKVRALI
SDSGERIKTAGPSTPVEVLGLNGTPEAGDVLNVVETEAQAREIAEYRAQAAKDKRAALGA
ATTLEQLMANAKANEDISELPILLKADVQGSAEAIVQAMAKIGNDEVRVRVLHSGVGAIT
ETDIGLAEASGAPVFGFNVRANTSARNTANQKGVEIRYYSVIYDLVDDVKAAASGLLSAE
IRETFIGYANIKEVFKVSGVGKVAGCLVTEGVARRSAGVRLLRDNVVIHEGTLKTLKRFK
DEVPEVQSGQECGMAFENYDDIRPNDVIEIFEREEVERKLT

NT seq 2466 nt +upstreamnt +downstreamnt
atgagcgacgacggaaaaaaaacactgggtttgatgggcgggtcacgttcgggaaatgtg
aaacaaagtttcagccacggccggaccaagaatgttgtggtggaaaccaagcgtaaacgc
gttgtcgtacccaagcccggtgccgcgaaacctgccgctcctggagctgtgcggggcggc
gatcctgcacgccggccggccggaatttctgacgcggaaatggagcgtcgtttaaaagct
gttcaagccgcaaaagcgcgcgagacagaagacgcagcacggcgcgcgcaagaagatctc
gagcgggaggctgaacgcaaccgtcgccgcgaagaacaggaaacaaaagagcgcgaactg
cgcgaacgcgaagagcggacgcaggcaaaagtcgctgctgaagagcaaaagaagcgcgaa
gcggaggccgcagcgctgcttgcagccgcaccgccaccgacacccgaagagcgggctgcc
aaaaccggcgttgtgcgtaacaaagttgctgagcctgtgcgccgtgaggaacctgcgcgt
ccaagccgcaacaaaggccgggaagacaaccgtcgctctggcaagctgactgttaatcag
gccagcgctggaaatgatgggcggcatcgctcaatggcgtcgatgaagcgcaagcaagag
cgcgcccgtcaaaaagcgatgggcgggactgttgagcgtgaaaagattatccgcgacgtg
caagtgccggacgcgatcatggtgcaagagctggccaatcgtatggctgagcgggtctct
gatgttgtgaaatctttgatgcaaatgggcatgatggtgacacagaaccaaaccatcgac
caagatacagctgagttgatcgtggaagagtttggtcacaaaattgtgcgcgtttctgat
gcggatgttgaggatgtgattgaccaagtggttgatagtcctgaagatcttaagcctcgt
gcgccaatcatcacggttatgggccatgttgatcacgggaaaacctcgcttttggatgcg
atccgtaatgcgcgggtggtctccggtgaagccggcggcattacccagcatatcggcgcc
tatcaggttgagcagaatggcgatcttttgaccttcctcgacaccccgggccacgcggcc
tttacctcgatgcgctcacgcggtgcgcaggtcacagatattgttatcttggttgttgct
gcagatgatgcggtgatgccacaaacaattgaggcgattgcccacgcaaaggcggccaat
gtgccgatgattgtggccatcaacaaaattgaccgccctgcagctgatccgcaaaaagtg
cggaccgatttgttgcaacatgaggtgatcgtggagcaaatgtccggtgaggtccaagac
gtagaagtctctgcgacaacgggccaaggcttggatcaattgctggaagcgattgctttg
cagtctgaaattttggagctgaaagccaatccaaaccgtgcagcctccggcgctgtcatt
gaagcgcagttggatgtcgggcgtggacctgtggccactgttttggtgcaaaacgggacg
ctgaaacttggcgatattttcgtggttggggaacaatggggcaaagtgcgcgccttgatc
agcgactccggggaacggattaagaccgctgggccgtcaacgcctgttgaagttctgggc
ctgaacggcacaccggaagcgggcgatgttctaaatgtggtggaaaccgaagcccaggcg
cgcgaaattgcagaatatcgtgcgcaagcggccaaagataaacgcgccgccctaggtgcc
gcgacaactttggaacagctcatggccaatgcgaaggccaatgaagatatcagcgagctg
ccaattcttttgaaagccgacgttcagggctctgcggaagcgatcgtgcaggccatggcg
aaaatcggcaatgacgaagttcgggtgcgggttttgcactctggtgtcggtgcgatcaca
gaaacagatatcggattggccgaagcctctggggcgccggtgtttggctttaacgtgcgg
gcaaatacctccgcgcggaacacagccaaccaaaaaggcgttgagattcgctattattca
gtgatttatgatttggttgatgatgtgaaagcggcggcctctggtctattgagcgccgaa
attcgcgaaacattcattggttacgccaatatcaaagaagtgttcaaagtgtcgggcgtt
ggcaaagtggctggttgcttggtgaccgaaggcgtggctcggcgctccgctggggtacgc
ttgctgcgcgataacgttgttattcatgaaggcacactgaaaacactgaagcgcttcaaa
gacgaggtgcctgaggtgcaatcgggccaagaatgtggcatggcctttgaaaattatgat
gatatcagaccaaatgatgtgatcgaaatttttgagcgcgaagaagtcgaacgcaagctg
acttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (81)   
   KEGG ORTHOLOGY (1)   
   RefGene (78)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (18)   
   Pfam (18)   
All databases (103)   

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