KEGG   Pan troglodytes (chimpanzee): 100611483
Entry
100611483         CDS       T01005                                 
Symbol
ZNF540
Name
(RefSeq) zinc finger protein 540 isoform X4
  KO
K09228  KRAB domain-containing zinc finger protein
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100611483 (ZNF540)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ptr03000]
    100611483 (ZNF540)
Transcription factors [BR:ptr03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    100611483 (ZNF540)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 KRAB zf-C2H2_6 Zn-ribbon_8 zf-C2H2_jaz zf_UBZ XPA_N C1_4 zf-C2H2_11 STL11_N
Other DBs
NCBI-GeneID: 100611483
NCBI-ProteinID: XP_003316388
Ensembl: ENSPTRG00000010912
VGNC: 2155
UniProt: A0A6D2XHH4 A0A2J8QID8
Position
19:35487354..35506493
AA seq 660 aa
MAHALVTFRDVAIDFSQKEWECLDTTQRKLYRDVMLENYNNLVSLGYSGSKPDVITLLEQ
GKEPCVAAKDVTGRQCPGLLSRHKTKKLSSEKDIHEISLSKGSIIEKSKTLHLKGSIFRN
EWQNKSEFEGQQGLKERSISQKKIVSKKMSTDRKHPSFTLNQRIHNSEKSCDSNLVQHGK
IDSDVKHDCKECGSTFNNVYQLTLHQKIHTGEKSCKCEKCGKVFSHSYQLTLHQRFHTGE
KPYECQECGKTFILYPQLNRHQKIHTGKKPYMCKKCDKGFFSRLELTQHKRIHTGKKSYE
CKECGKVFQLIFYFKEHERIHTGKKPYECKECGKAFSVCGQLTRHQKIHTGVKPYECKEC
GKTFRLSFYLTEHRRTHAGKKPYECKECGKSFNVRGQLNRHKTIHTGIKPFACKVCEKAF
SYSGDLRVHSRIHTGEKPYECKECGKAFMLRSVLTEHQRLHTGVKPYECKECGKTFRVRS
QISLHKKIHTDVKPYKCVRCGKTFRFGFYLTEHQRIHTGEKPYKCKECGKAFIRRGNLKE
HLKIHSGLKPYDCKECGKSFSRRGQFTEHQKIHTGVKPYKCKECGKAFSRSVDLRIHQRI
HTGEKPYECKQCGKAFRLNSHLTEHQRIHTGEKPYECKVCRKAFRQYSHLYQHQKTHNVI
NT seq 1983 nt   +upstreamnt  +downstreamnt
atggcccatgcattggtgacgttcagggatgtggctatagacttctctcagaaggaatgg
gagtgcctggacactacccagaggaaattgtacagagatgtgatgttggagaattataat
aacttggtctcactgggatattctggctcaaagccagatgtgattaccttactggagcaa
gggaaagagccctgcgtggcggcgaaggatgtgacaggaagacagtgccccggtttgtta
tccaggcataagaccaagaaattatcttcagaaaaggacattcatgaaatcagtttatcc
aaagggagtataatagaaaaaagtaaaactcttcatctgaaaggatccatttttagaaat
gagtggcagaacaaaagtgagtttgagggtcaacagggacttaaagaaagatctatcagt
caaaagaaaatcgtctctaaaaaaatgtcaactgatagaaaacatccctcttttactctg
aatcagagaattcataatagtgagaaaagctgtgactcaaacttggttcaacatgggaaa
atagattctgatgtgaaacatgattgtaaagaatgtgggagtacttttaataatgtctat
cagcttactctccatcagaaaattcatactggtgaaaaatcctgtaaatgtgagaaatgt
gggaaagtttttagtcatagctatcaacttactctgcatcagagatttcatactggtgag
aaaccctatgaatgtcaagaatgtgggaagacctttattctttacccacaacttaatcga
catcagaaaattcacactggtaaaaaaccctatatgtgtaagaaatgtgataagggtttt
tttagtagattagaacttactcaacataaaagaattcatactggtaagaaatcttatgaa
tgtaaagaatgtggaaaagtttttcaacttattttctactttaaagaacatgagagaatt
catacaggtaagaaaccctatgaatgtaaggagtgtgggaaagcttttagtgtatgcgga
caacttacccgtcatcagaaaattcatactggtgtaaaaccctacgaatgtaaggaatgt
ggaaagacctttagacttagtttttaccttactgaacacagaagaactcatgcaggtaag
aaaccttatgaatgtaaggagtgtgggaaatcatttaatgtgcgtggacagcttaatcgg
cataaaacaatccatactggtataaaaccttttgcatgtaaggtgtgtgagaaggctttt
agttatagtggtgacctcagagtacattctagaattcatactggagagaaaccatatgaa
tgtaaggaatgcgggaaagcctttatgcttcgttcagtccttactgaacatcagagactt
catactggtgtgaagccctacgaatgtaaggaatgtgggaagacctttcgagttcgttct
caaattagtctacataagaaaattcatactgatgtgaagccctacaaatgtgtacgatgt
gggaagacctttagatttggtttctaccttactgaacaccagagaattcacactggtgaa
aagccctataaatgtaaagaatgtggaaaggcctttattcgtagagggaatcttaaagaa
catctgaaaattcattctggtttaaaaccctatgactgtaaagaatgtgggaagtccttt
agtcggcgtgggcagttcactgaacatcagaaaattcatacgggtgtaaaaccatacaaa
tgtaaagaatgtgggaaggcctttagtcgtagtgtagaccttagaatacatcaaagaatt
catactggtgagaaaccctatgagtgtaaacaatgtgggaaggcctttagacttaattca
caccttactgaacatcagagaattcatactggtgagaaaccctatgagtgtaaggtatgt
agaaaggcctttagacaatattcacatctttatcaacatcagaaaactcataatgtaatt
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (12)   
   Pfam (12)   
All databases (30)   

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