KEGG   Pan troglodytes (chimpanzee): 454490
Entry
454490            CDS       T01005                                 
Symbol
SHMT1
Name
(RefSeq) LOW QUALITY PROTEIN: serine hydroxymethyltransferase, cytosolic
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr00260  Glycine, serine and threonine metabolism
ptr00630  Glyoxylate and dicarboxylate metabolism
ptr00670  One carbon pool by folate
ptr01100  Metabolic pathways
ptr01200  Carbon metabolism
ptr01230  Biosynthesis of amino acids
ptr01240  Biosynthesis of cofactors
ptr01523  Antifolate resistance
Module
ptr_M00141  C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    454490 (SHMT1)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    454490 (SHMT1)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    454490 (SHMT1)
 09160 Human Diseases
  09176 Drug resistance: antineoplastic
   01523 Antifolate resistance
    454490 (SHMT1)
Enzymes [BR:ptr01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     454490 (SHMT1)
SSDB
Motif
Pfam: SHMT
Other DBs
NCBI-GeneID: 454490
NCBI-ProteinID: XP_024200918
Ensembl: ENSPTRG00000008851
VGNC: 9609
Position
1:complement(42657973..42660463)
AA seq 493 aa
MCGAVFRQLRTHAMAMPVNRAHKDADLWSSHDKMLAQPLKDSDVEVYNIIKESNRQRVGL
ELITSENFASXAVLEALGSCLNNKYSEGYPGQRYXGRTDFTHALETLCQKRALQAYKLDP
QCWGVNVQPCSGSPANFXVYTALVEPHGCIMGLDLPDGGHLTHRFMTDKKKISATSIFFE
SMPYKVNPDTGYINYDQLEENTRLFHPKLISAGTSCSSXNLDYARCGKNADENGVYLMVD
MARISRLVAAGVVPSPCEHCHXTTHKNLRGCQVRMIFYRKGVQSMDPKTGKEILYNLESL
INSAVFPGLQGGPHNHATAGVAVALKQAMTLEFEVYQHHVVANCRTLSEALTELGYQTVT
GGSDKHLILMDLHSIKGTDGRRAEKVLEACSIACNKNTCPDDRNTLRPRGLRLGNPALTS
LGLLEKGFQKVAHFIHRGIELTLQIQSNAGIRATLKEFKERLAGHKYQGCVQALQEEVES
FATLFPLPGLPDF
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgtgcggggctgtgttccggcagcttcggacccatgcaatggcaatgccagtcaacagg
gcccacaaggatgctgacctgtggtcctcacatgacaagatgctggcgcagcccctcaaa
gacagcgatgttgaggtttacaacatcattaaggagagtaaccggcagagggttggattg
gagctgattacctcggagaatttcgccagctaggcagttttggaggccctaggctcttgc
ttaaataacaaatactctgaggggtacccgggccagagatactaaggcaggactgacttt
actcatgcgctggagaccctctgtcagaagcgagccctgcaggcctataagctggaccca
cagtgctggggggtcaacgtccagccttgctcaggctcccctgcaaactttngagtgtac
actgccctggtggaaccccatgggtgcatcatgggcctggacctgccagatgggggtcac
ctgacccacaggttcatgacagacaagaagaaaatctctgccacgtccatcttctttgaa
tctatgccctataaggtgaacccagacactggctacatcaactatgaccagctggaggag
aacacccgcctcttccacccgaagctgatcagtgcaggaaccagctgctcctcctaaaac
ctggactatgcccgctgcggaaaaaacgcagatgagaatggggtgtatctcatggtggac
atggcacgtatcagcaggctggtggcagctggcgtggtgccctccccatgtgaacactgc
cacnncaccactcacaagaacctgagaggctgccaagtccgcatgatcttctacaggaaa
ggagtgcaaagtatggatcccaagactggcaaagagattctgtacaacctggagtctctc
atcaactctgctgtgttccctggccttcagggaggtccccacaaccacgccactgctggg
gttgctgtggccctgaagcaagctatgactctagaatttgaagtttatcagcaccatgtg
gtggccaactgcaggactctgtctgaggcactgacggagctgggctaccaaacagtcaca
ggtggttctgataaacatttgatcctcatggatctccattcaatcaaaggcacagatggc
agaagggctgagaaggtcctagaagcctgttctattgcctgcaacaagaacacctgccca
gatgacagaaacactctacggcccaggggactgcggctggggaacccagcactgacatcc
cttggacttttggaaaaaggcttccaaaaggtagcccactttatccacagagggatagag
ctaaccctgcagatccagagcaacgctggcatcagagccaccctgaaagagttcaaggag
agactagcagggcataaataccaggggtgtgtgcaggctctccaggaggaggttgagagc
tttgccactctcttccctctgcctggcctgcctgacttctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (8)   
   KEGG MODULE (5)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (47)   

Download RDF
DBGET integrated database retrieval system