KEGG   Pan troglodytes (chimpanzee): 454655
Entry
454655            CDS       T01005                                 
Symbol
SMARCE1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X5
  KO
K11651  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr03082  ATP-dependent chromatin remodeling
ptr04714  Thermogenesis
ptr05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    454655 (SMARCE1)
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    454655 (SMARCE1)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    454655 (SMARCE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ptr03000]
    454655 (SMARCE1)
   03021 Transcription machinery [BR:ptr03021]
    454655 (SMARCE1)
   03036 Chromosome and associated proteins [BR:ptr03036]
    454655 (SMARCE1)
Transcription factors [BR:ptr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG TOX
    454655 (SMARCE1)
Transcription machinery [BR:ptr03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     454655 (SMARCE1)
Chromosome and associated proteins [BR:ptr03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    454655 (SMARCE1)
   PBAF complex
    454655 (SMARCE1)
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1 GCN5L1 Sarcoglycan_2 Pepsin-I3
Other DBs
NCBI-GeneID: 454655
NCBI-ProteinID: XP_001169953
Ensembl: ENSPTRG00000022902
VGNC: 9635
UniProt: A0A2J8KGI3
Position
19:27452521..27472765
AA seq 341 aa
MPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESM
KAYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAEDPDDYDDGFSMKH
TATARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMVHQRKLEAELLQIEE
RHQEKKRKFLESTDSFNNELKRLCGLKVEVDMEKIAAEIAQAEEQARKRQEEREKEAAEQ
AERSQSSIVPEEEQAANKGEEKKDDENIPMETEETHLEETTESQQNGEEGTSTPEDKESG
QEGVDSMAEEGTSDSNTGSESNSATVEEPPTDPIPEDEKKE
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgccctacatgaggtacagcagaaaggtctgggaccaagtaaaggcttccaaccctgac
ctaaagttgtgggagattggcaagattattggtggcatgtggcgagatctcactgatgaa
gaaaaacaagaatatttaaacgaatacgaagcagaaaagatagagtacaatgaatctatg
aaggcctatcataattcccccgcgtaccttgcttacataaatgcaaaaagtcgtgcagaa
gctgctttagaggaagaaagtcgacagagacaatctcgcatggagaaaggagaaccgtac
atgagcattcagcctgctgaagatccagatgattatgatgatggcttttcaatgaagcat
acagccaccgcccgtttccagagaaaccaccgcctcatcagtgaaattcttagtgagagt
gtggtgccagacgttcggtcagttgtcacaacagctagaatgcaggtcctcaaacggcag
gtccagtccttaatggttcatcagcgaaaactagaagctgaacttcttcaaatagaggaa
cgacaccaggagaagaagaggaaattcctggaaagcacagattcatttaacaatgaactt
aaaaggttgtgcggtctgaaagtagaagtggatatggagaaaattgcagctgagattgca
caggcagaggaacaggcccgcaaaaggcaggaggaaagggagaaggaggccgcagagcag
gctgagcgcagtcagagcagcatcgttcctgaggaagaacaagcagccaacaaaggcgag
gagaagaaagacgacgagaacattccgatggagacagaggagacacaccttgaagaaaca
acagagagccaacagaatggtgaagaaggcacgtctactcctgaggacaaggagagtggg
caggagggggtcgacagtatggcagaggaaggaaccagtgatagtaacactggctcggag
agcaacagtgcaacagtggaggagccaccaacagatcccataccagaagatgagaaaaaa
gaataa

  All links  
Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (13)   
   RefSeq(nuc) (5)   
   GenBank (4)   
   EMBL (4)   
Protein domain (6)   
   Pfam (6)   
All databases (30)   

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