KEGG   Pan troglodytes (chimpanzee): 455661
Entry
455661            CDS       T01005                                 
Symbol
CLEC4M
Name
(RefSeq) C-type lectin domain family 4 member M
  KO
K06563  C-type lectin domain family 4 member L/M
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr03260  Virion - Human immunodeficiency virus
ptr03264  Virion - Flavivirus
ptr04145  Phagosome
ptr04625  C-type lectin receptor signaling pathway
ptr05152  Tuberculosis
ptr05162  Measles
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03260 Virion - Human immunodeficiency virus
    455661 (CLEC4M)
   03264 Virion - Flavivirus
    455661 (CLEC4M)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    455661 (CLEC4M)
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    455661 (CLEC4M)
 09160 Human Diseases
  09172 Infectious disease: viral
   05162 Measles
    455661 (CLEC4M)
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    455661 (CLEC4M)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ptr04131]
    455661 (CLEC4M)
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:ptr04054]
    455661 (CLEC4M)
   04090 CD molecules [BR:ptr04090]
    455661 (CLEC4M)
   04091 Lectins [BR:ptr04091]
    455661 (CLEC4M)
Membrane trafficking [BR:ptr04131]
 Endocytosis
  Phagocytosis
   C-lectin receptors
    455661 (CLEC4M)
Pattern recognition receptors [BR:ptr04054]
 Membrane-bound pattern recognition receptors
  C-type lectin receptors
   455661 (CLEC4M)
CD molecules [BR:ptr04090]
 Proteins
  455661 (CLEC4M)
Lectins [BR:ptr04091]
 C-Type lectins
  Group 2: Type II membrane receptors (Asialoglycprotien and DC receptors)
   DC-SIGN subgroup
    455661 (CLEC4M)
SSDB
Motif
Pfam: Lectin_C DUF2170 DUF2730 Occludin_ELL Syntaxin_2 DIMCO_N Vps5 Tup_N Med10 Com_YlbF GIT1_C UL45 DUF2357
Other DBs
NCBI-GeneID: 455661
NCBI-ProteinID: NP_001065255
Ensembl: ENSPTRG00000010404
VGNC: 6620
UniProt: Q8HYC0 A0A2J8J6C6
Position
19:7995590..8002265
AA seq 445 aa
MSDSKEPRVQQLGLLEEDPTTSGIRLFPRDFQFQQIHGHKSSTGCLGHGPLVLQLLSFTL
LAGVLVAILVQVSKVPSSLSQEQSEQDTIYQNLTQLKAAVGELSEKSKLQEIYQELTQLK
AAVGELPEKSKLQEIYQELTQLKAAVGELPEKSKLQEIYQELTQLKAAVGELPEKSKLQE
IYQELTQLKAAVGELPEKSKLQEIYQELTQLKAAVGELPEKSKLQETYQELTQLKAAVGE
LPEKSKLQEIYQELTQLKAAVGELPEKSELQEIYQELTQLKAALGKLPDQSKQQQIYQEL
TDLKTAFERLCRHCPKDWTFFQGNCYFMSNSQRNWHNSVTACREVRAQLVVIKSAEEQNF
LQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGS
GWNDNRCDIDNYWICKKPAVCFRDE
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagtgactccaaggaaccaagggtgcagcagctgggcctcctggaagaagatccaaca
accagtggcatcagactttttccaagagactttcaattccagcagatacatggccacaag
agctctacagggtgtcttggccatggtcccctggtgctgcaactcctctccttcacgctc
ttggctggggtcctggtggccatccttgtccaagtgtccaaggtccccagctccctaagt
caggaacaatccgagcaagacacaatctaccagaacctgacccagcttaaagctgcagtg
ggtgagctctcagagaaatccaagctgcaggagatctaccaggagctgacccagctgaag
gctgcagtgggtgagttgccagagaaatccaagctgcaggagatctaccaggagctgacc
cagctgaaggctgcagtgggtgagttgccagagaaatccaagctgcaggagatctaccag
gagctgacccagctgaaggctgcagtgggtgagttgccagagaaatccaagctgcaggag
atctaccaggagctgacccagctgaaggctgcagtgggtgagttgccagagaaatccaag
ctgcaggagatctaccaggagctgacccagctgaaggctgcagtgggtgagttgccagag
aaatccaagctgcaggagacctaccaggagctgacccagctgaaggctgcagtgggtgag
ttgccagagaaatccaagctgcaggagatctaccaggagctgacccagctgaaggctgca
gtgggtgagttgccagagaaatccgagctgcaggagatctaccaggagctgacccagctg
aaggctgcacttggtaaattgccagaccagtccaagcagcagcaaatctatcaagaactg
accgatttgaagactgcatttgaacgcctgtgccgccactgtcccaaggactggacattc
ttccaaggaaactgttacttcatgtctaactcccagcggaactggcacaactccgtaacc
gcctgccgggaagtgagggcccagctcgtcgtaatcaaaagtgctgaggagcagaacttc
ctacagctgcagacttccagaagtaaccgcttctcctggatgggactttcagacctaaat
caggaaggcacgtggcaatgggtggacggctcacctctgtcacccagcttccagcgatac
tggaacagtggagaacccaacaatagtgggaatgaagactgtgcggaatttagtggcagt
ggctggaacgacaatcgatgtgacattgacaattactggatctgcaaaaagcccgcagtc
tgcttcagagacgaatag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (13)   
   Pfam (13)   
All databases (43)   

Download RDF
DBGET integrated database retrieval system