KEGG   Pan troglodytes (chimpanzee): 458381
Entry
458381            CDS       T01005                                 
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X2
  KO
K03129  transcription initiation factor TFIID subunit 4
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr03022  Basal transcription factors
ptr05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    458381 (TAF4)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    458381 (TAF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptr03021]
    458381 (TAF4)
   03036 Chromosome and associated proteins [BR:ptr03036]
    458381 (TAF4)
Transcription machinery [BR:ptr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     458381 (TAF4)
   Coactivators
    SAGA/TFTC/STAGA complex
     458381 (TAF4)
Chromosome and associated proteins [BR:ptr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     458381 (TAF4)
SSDB
Motif
Pfam: TAF4 TAFH tRNA-synt_1c
Other DBs
NCBI-GeneID: 458381
NCBI-ProteinID: XP_054530618
Ensembl: ENSPTRG00000013695
VGNC: 6313
Position
21:complement(68282823..68375847)
AA seq 1058 aa
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAHHHHLAPRTPEVRAAAAGALGN
HVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGPAPPAAKLRPPPEGSAGACAPVPAAAA
VAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNS
HHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPA
AAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSG
QPGPGAAAAAPAPGVKAESPKTVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPA
AVPPPAPGTPTGLPKGATGAVTQSLPRTPTATTSGIRATLTPTVLAPRLPQPPQNPTNIQ
NFQLPPGMVLVRSENGQLLMIPQQALAQMQAQAHAQPQTTMAPRPATPTSAPPVQISTVQ
APGTPIIARQVTPTTIIKQVSQAQTTVQPSATLQRSPGVQPQLVLGGAAQTASLGTATAV
QTGTPQRTVPGATTTSSAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNL
LDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQPPPPAS
QATTALTAVVLSSSVQRTAGKTAATVTSALQPPVLSLTQPTQVGVGKQGQPTPLVIQQPP
KPGALIRPPQVTLTQTPMVALRQPHNRIMLTTPQQIQLNPLQPVPVVKPAVLPGTKALSA
VSAQAAAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSC
KDETFLLQAPLQRRILEIGKKHGITELHPDVVSYVSHATQQRLQNLVEKISETAQQKNFS
YKDDDRYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQK
AKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDCPGPGSGAEGSGPGSVVPGSSGVGTP
RQFTRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK
NT seq 3177 nt   +upstreamnt  +downstreamnt
atggcggcgggctcggatctgctggacgaggtcttcttcaacagcgaggtggacgagaaa
gtggtgagcgacctggtgggctcgctggagtcgcagctggcggccagcgcggcccaccac
caccacctcgcgccgcgcacgcccgaggtgcgggccgcggccgccggcgcgctcgggaac
catgttgtgagcggcagcccggccggagccgcgggcgcagggccggccgcccccgccgag
ggcgcgcccggagcggcgccggagccgccccccgcagggcccgcgccgcccgccgcgaag
ctgaggccgccgcccgagggcagcgcgggggcctgcgccccggtgcccgccgccgccgcc
gtcgccgcggggcccgagcccgcccccgccggccccgccaagcccgccggccccgccgcg
ctggccgcccgcgccggccccggccccggccccgggcccggccccggccccggccctggc
aagcccgccggccccggcgccgcgcaaactttgaatgggagcgccgcgctgctgaactcg
caccacgccgccgcacctgctgtcagcctggtcaacaacgggcccgccgcgctgctgccg
ctgcccaagcccgccgcccccggcactgtcatccagacgccccctttcgtgggcgccgcc
gcgccccccgcgcccgccgcgccctcgccccccgccgcccccgcgcccgccgcccccgcc
gccgccccgcccccgccaccccccgcgcccgccaccctggcccggccgcccggccacccc
gccggacccccgaccgccgcgcccgccgtgccgccccccgccgccgcccagaacgggggc
agcgccggggcagcccccgcccccgccccggccgccgggggccccgcgggggtcagcggc
cagcccgggcccggcgcggcggctgcggcgccggcgccgggggtcaaggccgagtcgccc
aagacggtggtgcaggcggcgcccccggcggcgcagaccctggcggccagcggcccggcc
agcacggcggccagcatggtcatcgggccaactatgcaaggggcgctgcccagcccggcc
gccgtcccgccgcccgcccccgggacccccaccgggctgcccaaaggcgcgaccggcgca
gtgacccagagcctgccccggacgcccacggccaccaccagcgggattcgggccaccctg
acgcccaccgtgctggccccccgcttgccgcagccgcctcagaacccgaccaacatccag
aacttccagctgcccccaggaatggtcctcgtccgaagtgagaatgggcagttgttaatg
attcctcagcaggccttggcccagatgcaggcgcaggcccatgcccagcctcagaccacc
atggcgcctcgccctgccacccccacaagtgcccctcccgtccagatctccaccgtacag
gcacctggaacacctatcattgcacggcaggtgaccccaactaccataattaagcaagtg
tctcaggcccagacaacggtgcagcccagtgcaaccctgcagcgctcgcccggcgtccag
cctcagctcgttctgggtggcgctgcccagacggcttcacttgggacggcgacagctgtt
cagacggggactcctcagcgcacggtaccaggggcgaccaccacttcctcagctgccacg
gaaactatggagaacgtgaagaaatgtaaaaatttcctatctacgttaataaaactggct
tcatctggcaagcagtctacagagacagcagctaatgtgaaagagctcgtgcagaattta
ctggatggaaaaatagaagcagaagatttcacaagcaggttataccgagaacttaattct
tcacctcaaccttaccttgtgcctttcctgaagaggagcttacccgccttgagacagctg
acccccgactccgcggccttcatccagcagagccagcagcagccgccaccgcccgcctcg
caggccaccactgcgctcacggccgtggtgctgagtagctcggtccagcgcacggccggg
aagacggcggccaccgtgaccagtgccctccagccccctgtgctcagcctcacgcagccc
acgcaggtcggcgtcggcaagcaggggcaacccacaccgctggtgatccagcagcctccg
aagccaggagccctgatccggcccccgcaggtgacgttgacgcagacacccatggtcgcc
ctgcggcagcctcacaaccggatcatgctcaccacgcctcagcagatccagctgaaccca
ctgcagccagtccctgtggtgaaacccgccgtgttacctggaaccaaagccctttccgct
gtctcggcacaagcagctgctgcacagaaaaataaactcaaggagcctgggggaggttcg
tttcgggatgatgatgacattaatgatgttgcatcgatggctggagtaaacttgtcagaa
gaaagtgcaagaatattagccaccaactctgaattggtgggcacgctaacgcggtcctgt
aaagatgaaaccttcctcctccaagcgcctttgcagagaagaatattagaaataggtaaa
aaacacggtataacggaattacatccagatgtagtaagttatgtatcacatgccacgcaa
caaaggctacagaatcttgtagagaaaatatcagaaacagctcagcagaagaacttttct
tacaaggatgacgacagatatgagcaggcgagtgacgtccgggcacagctcaagtttttt
gaacagcttgatcaaatcgaaaagcagaggaaggatgagcaggagcgggagatcctgatg
agggcagcaaagtctcggtcaagacaagaagatccagaacagttaaggctgaaacagaag
gcaaaggagatgcagcaacaggaactggcacaaatgagacagcgggacgccaacctcaca
gcactagcagcgatcgggcccaggaaaaagaggaaagtggactgtccggggccgggctcg
ggagcagaggggtcgggccccggctcagtggtcccaggcagctcgggtgtcggaaccccc
agacagttcacgcgacaaagaatcacgcgggtcaacctcagggacctcatattttgttta
gaaaatgaacgtgagacaagccattcactgctgctctacaaagcattccttaagtga

  All links  
Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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