KEGG   Pan troglodytes (chimpanzee): 459449
Entry
459449            CDS       T01005                                 
Symbol
NPAS2
Name
(RefSeq) neuronal PAS domain-containing protein 2 isoform X4
  KO
K09026  neuronal PAS domain-containing protein 2
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr04710  Circadian rhythm
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    459449 (NPAS2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ptr03000]
    459449 (NPAS2)
Transcription factors [BR:ptr03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    459449 (NPAS2)
SSDB
Motif
Pfam: PAS_11 PAS_3 PAS HLH PAS_9 bHLH_NPAS4
Other DBs
NCBI-GeneID: 459449
NCBI-ProteinID: XP_003309214
Ensembl: ENSPTRG00000012287
VGNC: 313
Position
12:complement(21939860..22116509)
AA seq 889 aa
MYAYGFVGRCAPFPAEEGRTFDLSKELGRSVTREGTGTTRLNSEPVPLLCLPLLNCSRKN
CIENLMDEDEKDRAKRASRNKSEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGF
LQKHNEVSAQTEICDIQQDWKPSFLSNEEFTQLMLEALDGFIIAVTTDGSIIYVSDSITP
LLGHLPSDVMDQNLLNFLPEQEHSEVYKILSSHMLVTDSPSPEYLKSDSDLEFYCHLLRG
SLNPKEFPTYEYIKFVGNFRSYNNVPSPSCNGFDNTLSRPCRVPLGKEVCFIATVRLATP
QFLKEMCIVDEPLEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLEL
LARCHQHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVVSYAD
VRVERRQELALEDPPSEALHSSALKDKGSSLEPRQHFNALDVGASGLNTSHSPSASSRSS
HKSSHTAMSEPTSTPTKLMAEASTPALPRSATLPQELPVPGLSQAATMPAPLPSPSSCDL
TQQLLPQTVLQSTPAPMAQFSAQFSMFQTIKDQLEQRTRILQANIRWQQEELHKIQEQLC
LVQDSNVQMFLQQPAVSLSFSSTQRPEAQQQLQQRSAAVTQPQLGAGPQLPGQISSAQVT
SQHLLRESSVISTQGPKPMRSSQLMQSSGRSGSSLVSPFSSATAVLPPSLNLTTPASTSQ
DASQCQPSPDFSHDRQLRLLLSQPIQPMMPGSCDARQPSEVSRTGRQVKYAQSQTVFQNP
DAHPANSSSAPMPVLLMGQAVLHPSFPASQPSPLQPAQARQQPPQHYLQVQAPTSLHSEQ
QDSLLLSTYSQQPGTLGYPQPPPAQPQPLRPPRRVSSLSESSGLQQPPR
NT seq 2670 nt   +upstreamnt  +downstreamnt
atgtatgcgtatggttttgttgggagatgtgcccctttcccagccgaggagggacgcacc
tttgacctttctaaagagctgggcaggtcggtaaccagggaagggacaggcaccacccgg
ctaaattcagaaccagtcccgctcctctgcttgccactccttaattgctcaaggaaaaac
tgcatagaaaatctaatggatgaagatgagaaagacagagccaagagagcttctcgaaac
aagtctgagaagaagcgtcgggaccagttcaatgttctcatcaaagagctcagttccatg
ctccctggcaacacgcggaaaatggacaaaaccaccgtgttggaaaaggtcatcggattt
ttgcagaaacacaatgaagtctcagcgcaaacggaaatctgtgacattcagcaagactgg
aagccttcattcctcagtaatgaagaattcacccagctgatgttggaggcattagatggc
ttcattatcgcagtgacaacagacggcagcatcatctatgtctctgacagtatcacgcct
ctccttgggcatttaccgtcggatgtcatggatcagaatttgttaaatttcctcccagaa
caagaacattcagaagtttataaaatcctttcttcccatatgcttgtgacggattccccc
tccccagaatacttaaaatctgacagcgatttagagttttattgccatcttctcagaggc
agcttgaacccaaaggaatttccaacttatgaatacataaaatttgtaggaaattttcgc
tcttacaacaatgtgcctagcccctcctgtaatggttttgacaacaccctttcaagacct
tgccgggtgccactaggaaaggaggtttgcttcattgccaccgttcgtctggcaacacca
caattcttaaaggaaatgtgcatagttgacgaacctttagaggaattcacttcaaggcat
agcttggaatggaaatttttatttctggatcacagagcacctccaatcataggatacctg
ccttttgaagtgctgggaacctcaggctatgactactaccacattgatgacctggagctc
ctggccaggtgtcaccagcacctgatgcagtttggcaaagggaagtcgtgttgctaccgg
tttctgaccaaaggtcagcagtggatctggctgcagactcactactacatcacctaccat
cagtggaactccaagcccgagttcatcgtgtgcacacactcggtggtcagttacgcagat
gtccgggtggaaaggaggcaggagctggctctggaagacccgccatccgaggccctccac
tcctcagcactaaaggacaagggctcaagcctggaacctcggcagcactttaatgcactc
gacgtgggtgcctcgggccttaataccagtcattcgccatcggcgtcctcaagaagttcc
cacaaatcctcgcacacagccatgtcagaacccacctccactcccaccaagctgatggca
gaggccagcaccccggctttgccaagatcagccaccctgccccaagagttacctgtcccc
gggctcagccaggcagccaccatgccggcccctctgccttccccatcgtcctgcgacctc
acacagcagctcctgcctcagaccgttctgcagagcacacccgctcccatggcacagttt
tcggcacagttcagcatgttccagaccatcaaagaccagctagagcagcggacgcggatc
ctgcaggccaatatccggtggcaacaggaagagctccacaagatccaggagcagctctgc
ctggtccaggactccaatgtccagatgttcctgcagcagccagctgtatccctgagcttc
agcagcacccagcgacctgaggctcagcagcagctacagcaaaggtcagctgcagtgact
cagccccagctcggggcgggcccccaacttccagggcagatctcctctgcccaggtcaca
agccagcacctgctcagagaatcaagtgtgatatcaacccagggtccaaagccaatgaga
agctcacagctaatgcagagcagcggccgctctggaagcagcctagtgtccccgttcagc
agcgccacagctgtgctcccgccaagtctgaatctgaccacacctgcttccacctcccag
gatgccagccagtgccagcccagcccagacttcagccatgatcggcagctcaggctgttg
ctgagccagcccatccagcccatgatgcccgggtcctgtgacgcaaggcagccctcggaa
gtcagcaggacgggacggcaagtcaagtacgcacagagccagaccgtgtttcaaaatcca
gacgcacaccccgccaacagcagcagcgccccgatgcccgtcctgctgatggggcaggcg
gtgctccaccccagcttccccgcctcccaaccatcgcccctgcagcctgcacaggcccgg
cagcagccaccgcagcactacctgcaggtacaggcaccaacctctttgcacagtgagcag
caggactcgctacttctctccacctactcacaacagccagggaccctgggctacccccaa
ccacccccagcacagccccagcccctacgtcctccccgaagggtcagcagtctgtctgag
tcgtcaggcctccagcagccgccccgataa

  All links  
Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (13)   
   RefSeq(nuc) (5)   
   GenBank (4)   
   EMBL (4)   
Protein domain (6)   
   Pfam (6)   
All databases (29)   

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