KEGG   Pan troglodytes (chimpanzee): 460252
Entry
460252            CDS       T01005                                 
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
  KO
K12035  tripartite motif-containing protein 71 [EC:2.3.2.27]
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    460252 (TRIM71)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptr03019]
    460252 (TRIM71)
   04121 Ubiquitin system [BR:ptr04121]
    460252 (TRIM71)
Enzymes [BR:ptr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     460252 (TRIM71)
Messenger RNA biogenesis [BR:ptr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     460252 (TRIM71)
Ubiquitin system [BR:ptr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    460252 (TRIM71)
SSDB
Motif
Pfam: NHL Filamin DUF5128 zf-B_box SGL zf-C3HC4 zf-RING_5
Other DBs
NCBI-GeneID: 460252
NCBI-ProteinID: XP_016796123
Ensembl: ENSPTRG00000030286
VGNC: 12215
UniProt: A0A6D2Y5Q0 H2R8E3
Position
3:33029148..33108912
AA seq 868 aa
MASFPETDFQICLLCKEMCGSPAPLSSNSSASSSSSQTSTSSGGGGGGPGAAARRLHVLP
CLHAFCRPCLEAHRLPAAGGGAAGEPLKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLL
DAVVATADEPPPKNGRAGAPAGAGGHSNHRHHAHHAHPRASASAPPLPQAPQPPAPSRSA
PGGPAASPSALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIER
GPPGPGAAAAAQQLGLGPPFPGPPFSILSVFPERLGFCQHHDDEVLHLYCDTCSVPICRE
CTMGRHGGHSFIYLQEALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMKAKVV
QSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLESTISAVQQ
VLEEGRALDILLARDRMLAQVQELKTVRSLLQPQEDDRVMFTPPDQALYLAIKSFGFVSS
GAFAPLTKATGDGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGNLFGAEV
SDQQNGTYVVSYRPQLEGEHLVSVTLCNQHIENSPFKVVVKSGRSYVGIGLPGLSFGSEG
DSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGVA
CDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTR
NHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDCQS
ARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGAQGSGFGQ
MDRPSGIAITPDGMIVVVDFGNNRILVF
NT seq 2607 nt   +upstreamnt  +downstreamnt
atggcttcgttccccgagaccgatttccagatctgcttgctgtgtaaggagatgtgcggc
tcgccggcgccgctctcctccaactcgtccgcgtcgtcgtcctcctcgcagacgtccacg
tcgtcggggggcggcggcgggggccctggggcggcggcgcgccgcctacacgtcctgccc
tgcctgcacgccttctgccgcccctgcctcgaggcgcaccggctgccggcggcgggcggc
ggcgcggcgggagagccgctcaagctgcgctgccccgtgtgcgaccagaaagtagtgcta
gccgaggcggcgggtatggacgcgctgccttcgtccgccttcctgcttagcaacctgctc
gacgcggtggtggccactgccgacgagccgccgcccaagaacgggcgcgccggcgctccg
gcgggagcgggcggccacagcaaccaccggcaccacgctcaccacgcgcacccgcgcgcg
tccgcctccgcgccgccactcccgcaggcgccgcagccgcccgcgccttcccgctcggca
cccggcggccctgccgcttccccgtcggcgctgctgctccgccggcctcacggctgcagc
tcgtgcgatgagggcaacgcagcttcttcgcgctgcctcgactgccaggagcacctgtgc
gacaactgcgtccgagcgcaccagcgcgtgcgcctcaccaaggaccactacatcgagcgc
ggcccgccgggtcccggtgccgcagcagcggcgcagcagctcgggctcgggccgcccttt
cccggcccgcccttctccatcctctcagtgtttcccgagcgcctcggcttctgccagcac
cacgacgacgaggtgctgcacctgtactgtgacacttgctctgtacccatctgtcgtgag
tgcacaatgggccggcatgggggccacagcttcatctacctccaggaggcactgcaggac
tcacgggcactcaccatccagctgctggcagatgcccagcagggacgacaggcaatccag
ctgagcatcgagcaggcccagacggtggcggaacaggtggagatgaaggcgaaggttgtg
cagtcggaggtcaaagccgtgactgcgaggcataagaaagccctggaggaacgcgagtgt
gagctgctgtggaaggtagaaaagatccgccaggtgaaagccaagtctctgtacctgcag
gtggagaagctgcggcaaaacctcaacaagcttgagagcaccatcagtgccgtgcagcag
gtcctggaggagggtagagcgctagacatcctactggcccgagaccggatgctggcccag
gtgcaggagctgaagaccgtgcggagcctcctgcagccccaggaagacgaccgagtcatg
ttcacaccccccgatcaggcactgtaccttgccatcaagtcttttggctttgttagcagc
ggggcctttgccccactcaccaaggccacgggcgatggcctcaagcgcgccctccagggt
aaggtggcctccttcacagtcattggttatgaccacgatggtgagccccgcctctcagga
ggcgacctgatgtcggctgtggtcctgggccctgatggcaacctgtttggtgcagaggtg
agtgatcagcagaatgggacatacgtggtgagttaccgaccccagctggagggtgagcac
ctggtatctgtgacactgtgcaaccagcacattgagaacagccctttcaaggtggtggtc
aagtcaggccgcagctacgtgggcattgggctcccgggcctgagcttcggcagtgagggt
gacagcgatggcaagctctgccgcccttggggtgtgagtgtagacaaggagggctacatc
attgtcgccgaccgcagcaacaaccgcatccaggtgttcaagccctgcggcgccttccac
cacaaattcggcaccctgggctcccggcctgggcagttcgaccgaccagccggcgtggcc
tgtgacgcctcacgcaggatcgtggtggctgacaaggacaatcatcgcatccagatcttc
acgttcgagggccagttcctcctcaagtttggtgagaaaggaaccaagaatgggcagttc
aactacccttgggatgtggcggtgaattctgagggcaagatcctggtctcagacacgagg
aaccaccggatccagctgtttgggcctgatggtgtcttcctaaataagtatggcttcgag
ggggctctctggaagcactttgactccccacggggtgtggccttcaaccatgagggccac
ttggtggtcactgacttcaacaaccaccggctcctggttattcaccccgactgccagtcg
gcacgctttctgggctcggagggcacaggcaatgggcagttcctgcgcccacaaggggta
gctgtggaccaggaagggcgcatcattgtggcggattccaggaaccatcgggtacagatg
tttgaatccaatggcagcttcctgtgcaagtttggtgctcaaggcagcggctttgggcag
atggaccgcccttccggcatcgccatcacccccgacggaatgatcgttgtggtggacttt
ggcaacaatcgaatcctcgtcttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (24)   

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