KEGG   Pan troglodytes (chimpanzee): 460275
Entry
460275            CDS       T01005                                 
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha isoform X1
  KO
K04843  voltage-gated sodium channel type XI alpha
Organism
ptr  Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ptr04040]
    460275 (SCN11A)
Ion channels [BR:ptr04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   460275 (SCN11A)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc PKD_channel GPHH
Other DBs
NCBI-GeneID: 460275
NCBI-ProteinID: XP_016796235
Ensembl: ENSPTRG00000014764
VGNC: 12182
UniProt: H2QMB6 A0A6D2WSY7
Position
3:complement(39030198..39146737)
AA seq 1792 aa
MDDRCYPVIFPDERNFRPFTSDSLAAIEKRIAIQKEKKKSKDQTGEVPQPRPQLDLKASR
KLPKLYGDIPRELIGKPLEDLDPFYRNHKTFMVLNRKRTIYRFSAKHALFIFGPFSSIRS
LAIRVSVHSLFSMFIIGTVIINCVFMATGPAKNSNSNNTDIAECVFTGIYIFEALIKILA
RGFILDEFSFLRDPWNWLDSIVIGIAIVSYIPGITIKLLPLRTFRVFRALKAISVVSRLK
VIVGALLRSVKKLVNVIILTFFCLSIFALVGQQLFMGSLNLKCISRDCKNISNPEAYDHC
FEKKENSPEFKMCGIWMGNSACSIQYECKHTKINPDYNYTNFDNFGWSFLAMFRLMTQDS
WEKLYQQTLRTTGLYSVFFFIVVIFLGSFYLINLTLAVVTMAYEEQNKNVAAEIEAKEKM
FQEAQQLLKEEKEALVAMGIDRSSLTSLETSYFTPKKRKLFGNKKRKSFFLRESGKDQPP
GSDSDEDCQKKPQLLEQTKRLSQNLSLDHFDEHGDPLQRQRALSAVSILTITMKEQEKSQ
EPCLPCGENLASKYLMWNCCPQWLCVKKVLRTVMTDPFTELAITICIIINTVFLAMEHHK
MEASFEKMLNIGNLVFTSIFIAEMCLKIIALDPYHYFRRGWNIFDSIVALLSFADVMNCV
LQKRSWPFLRSFRVLRVFKLAKSWPTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGM
QLFGHSFNSRKSPKLCNPTGPTVSCLRHWHMGDFWHSFLVVFRILCGEWIENMWECMQEE
NTSSSSLCVIVFILITVIGKLVVLNLFIALLLNSFSNEERNGNLEGEARKTKVQLALDRF
RRAFCFVRHTLEHFCHKWCRKQNLPQQKEVTGGCAAQSKDIIPLVTEMKRGSETQEELGI
LTSVPKTLGVRHDWTWLAPLAEEEDDVEFSGEDNAQRITQPESERQAYELHQENKKPTSQ
RVQSVEIDMFSEDEPHLTIQDPRKKSDVTSILSECSTIDLQDGFGWLPEMVPKKQPERCL
PKGFGCCFPCCSVDKRKPPWVIWWNLRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVR
LENQPKIQELLNCTDIIFTHIFILEMVLKWVAFGFGKYFTSAWCCLDFIIVIVSVTTLIN
LMELKSFRTLRALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLVFCILGVYF
FSGKFGKCINGTDSVINYTIITNKSQCESGNFSWINQKVNFDNVGNAYLALLQVATFKGW
MDIIYAAVDSTEKEQQPAFESNSFGYIYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKLG
GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKCQGLVFDIVTSQIFDIIIISLIILN
MISMMAESYNQPKAMKSILDHLNWVFVVIFTLECLIKIFALRQYYFTNGWNLFDCVVVLL
SIVSTMISTLENQEHIPFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFN
IGLLLFLIMFIYAILGMNWFSKVNPEAGIDDIFNFKSFASSMLCLFQISTSAGWDSLLSP
MLRSKESCNSSSESCHLPGIATSYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLG
EDDFDIFYEVWEKFDPEATQFIKYSALSDFADALPEPLRVAKPNKYQFLVMDLPMVSEDR
LHCMDILFAFTARVLGGSDGLDSMKAMMEEKFMEANPLKKLYEPIVTTTKRKEEERGAAI
IQKAFRKYMMKVTKGDQGDQNDLENRPHSPLQTLCNGDLSSFGVAKGKVHCD
NT seq 5379 nt   +upstreamnt  +downstreamnt
atggatgacagatgctacccagtaatctttccagatgagcggaatttccgccccttcact
tctgactctctggctgcaattgagaagcggattgccatccaaaaggagaaaaagaagtct
aaagaccagacaggagaagtaccccagcctcggcctcagcttgacctaaaggcctccagg
aagttgcccaagctctatggtgacattcctcgtgagctcataggaaagcctctggaagac
ttggacccattctaccgaaatcataagacatttatggtgttaaacagaaagaggacaatc
taccgcttcagtgccaagcatgccttgttcatttttgggcctttcagttcaatcagaagt
ttagccattagagtctcagtccattcattgttcagcatgttcattatcggcaccgttatc
atcaactgcgtgttcatggctacagggcctgctaaaaacagcaacagcaacaatactgac
attgcagagtgtgtcttcactgggatttatatttttgaagctttgattaaaatattggca
agaggtttcattctggatgagttttctttccttcgagatccatggaactggctggactcc
attgtcattggaatagcgattgtgtcatatattccaggaatcaccatcaaactattgccc
ctgcgtaccttccgtgtgttcagagctttgaaagcaatttcagtagtttcacgtctgaag
gtcatcgtgggggccttgctgcgctctgtgaagaagctggtcaacgtgattatcctcacc
ttcttttgcctcagcatctttgccctggtaggtcagcagctcttcatgggaagtctgaac
ctgaaatgcatctcaagggactgtaaaaatatcagtaacccggaagcttatgaccattgc
tttgaaaagaaagaaaattcacctgaattcaaaatgtgtggcatctggatgggtaacagt
gcctgttccatacaatatgaatgtaagcacaccaaaattaatcctgactataattatacg
aattttgacaactttggctggtcttttcttgccatgttccggctgatgacccaagattcc
tgggagaagctttatcaacagaccctgcgtactactgggctctactcagtcttcttcttc
attgtggtcattttcctgggctccttctacctgattaacttaaccctggctgttgttacc
atggcatatgaggagcagaacaagaatgtagctgcagagatagaggccaaggaaaagatg
tttcaggaagcccagcagctgttaaaggaggaaaaggaggctctggttgccatgggaatt
gacagaagttcacttacttcccttgaaacatcatattttaccccaaaaaagagaaagctc
tttggtaataagaaaaggaagtccttctttttgagagagtctgggaaagaccagcctcct
gggtcagattctgatgaagattgccaaaaaaagccacagctcctagagcaaaccaaacga
ctgtcccagaatctatcactggaccactttgatgagcatggagatcctctccaaaggcag
agagcactgagtgctgtcagcatcctcaccatcaccatgaaggaacaagaaaaatcacaa
gagccttgtctcccttgcggagaaaacctggcatccaagtacctcatgtggaactgttgc
ccccagtggctgtgcgttaagaaggtcctgagaactgtgatgactgacccatttactgag
ctggccatcaccatctgcatcatcatcaacactgtcttcttggccatggagcatcacaag
atggaggccagttttgagaagatgttgaatatagggaatttggttttcactagcattttt
atagcagaaatgtgcctaaaaatcattgcgctcgatccctaccactactttcgccgaggc
tggaatatttttgacagcattgttgctcttctgagttttgcagatgtaatgaactgtgta
cttcaaaagagaagctggccattcttgcgttccttcagagtgctcagggtcttcaagtta
gccaaatcctggccaactttgaacacactaattaagataatcggcaactctgtcggagcc
cttggaagcctgactgtggtcctggtcattgtgatctttattttctcggtagttggcatg
cagctttttggccatagcttcaattcccgaaagagtccaaaactctgtaacccgacaggc
ccgacagtctcatgtttacggcactggcacatgggggatttctggcactccttcctggtg
gtattccgcatcctctgcggggaatggatcgaaaatatgtgggaatgtatgcaagaagag
aatacatcatcatcatcattgtgtgttattgtcttcatattgatcacagtgataggaaaa
cttgtggtgctcaacctcttcattgccttactgctcaattcctttagcaatgaggaaaga
aatggaaacttagaaggagaggccaggaaaactaaagtccagttagcactggatcgattc
cgccgggctttttgttttgtgagacacactcttgagcatttctgtcacaagtggtgcagg
aagcaaaacttaccacagcaaaaagaggtgacaggaggctgtgctgcacaaagcaaagac
atcattcccctggtcacggagatgaaaaggggctcagagacccaggaggagcttggtata
ctaacctctgtaccaaagaccctgggcgtcaggcatgattggacttggttggcaccactt
gcggaggaggaagatgatgttgaattttctggtgaagataatgcacagcgcatcacacaa
cctgagtctgaacgacaggcctatgagctccatcaggagaacaagaagcccaccagccag
agagttcaaagtgtggaaattgacatgttctctgaagatgagcctcatctgaccatacag
gatccccgaaagaagtctgatgttaccagtatactatcagaatgtagcaccattgatctt
caggatggctttggatggttacctgagatggttcccaaaaagcaaccagagagatgtttg
cccaaaggctttggttgctgctttccatgctgtagcgtggacaagagaaagcctccctgg
gtcatttggtggaacctgcggaaaacctgctaccaaatagtgaaacacagctggtttgag
agctttattatctttgtgattctgctgagcagtggggcactgatatttgaagatgttcgc
cttgagaaccaacccaaaatccaagaattactaaattgtactgacattatttttacacat
atttttatcctggagatggtactaaaatgggtagccttcggatttggaaagtatttcacc
agtgcctggtgctgccttgatttcatcattgtgattgtctctgtgaccaccctcattaac
ttaatggaattgaagtccttccggactctacgagcactgaggcctcttcgtgcgctgtcc
cagtttgaaggaatgaaggtggtggtcaatgctctcataggtgccatacctgccattctg
aatgttttgcttgtctgcctcattttctggctcgtattttgtattctgggagtatacttc
ttttctggaaaatttgggaaatgcattaatggaacagactcagttataaattataccatc
attacaaataaaagtcaatgtgaaagtggcaatttctcttggatcaaccagaaagtcaac
tttgacaatgtgggaaatgcttacctcgctctgctgcaagtggcaacatttaagggctgg
atggatattatatatgcagctgttgattccacagagaaagaacaacagccagcgtttgag
agcaattcattcggttacatttacttcgtagtctttatcatctttggctcattcttcact
ctgaatctcttcattggcgttatcattgacaacttcaaccaacagcagaaaaagttaggt
ggccaagacatttttatgacagaagaacagaagaaatactataatgcaatgaaaaaatta
ggatccaaaaaacctcaaaaacccattccacggcctctgaacaaatgtcaaggtctcgtg
ttcgacatagtcacaagccagatctttgacatcatcatcataagtctcattatcctaaac
atgattagcatgatggctgaatcatacaaccaacccaaagccatgaaatccatccttgac
catctcaactgggtctttgtggtcatctttacattagaatgtctcatcaaaatctttgct
ttgaggcaatactacttcaccaatggctggaatttatttgactgtgtggtcgtgcttctt
tccattgttagtacaatgatttctaccttggaaaatcaggagcacattcctttccctccg
acgctcttcagaattgtccgcttggctcggattggccgaatcctgaggcttgtccgggct
gcacgaggaatcaggactctcctctttgctctgatgatgtcgcttccttctctgttcaac
attggtcttctactctttctgattatgtttatctatgccattttgggtatgaactggttt
tccaaagtgaatccagaggctggaattgatgacatattcaacttcaagtcttttgccagc
agcatgctctgtctcttccagataagcacatcagcaggttgggattccctgctcagcccc
atgctgcgatcaaaagaatcatgtaactcttcctcagaaagctgccacctccctggcata
gccacatcctactttgtcagttacattatcatctcctttctcattgttgtcaacatgtac
attgctgtgattttagagaacttcaatacagccactgaagaaagtgaggaccctttgggt
gaagatgactttgacatattttatgaagtgtgggaaaagtttgacccagaagcaacacaa
tttatcaaatattctgccctttctgactttgctgatgccttgcctgagcctttgcgtgtc
gcaaagccaaataaatatcaatttctagtaatggacttgcccatggtgagtgaagatcgc
ctccactgcatggatattcttttcgccttcaccgctagggtactcggtggctctgatggc
ctagatagcatgaaagcaatgatggaagagaagttcatggaagccaatcctctcaagaag
ttgtatgaacccatagtcaccaccaccaagagaaaggaagaggaaagaggtgctgctatt
attcaaaaggcctttcgaaagtacatgatgaaggttaccaagggtgaccaaggtgaccaa
aatgacttggaaaacaggcctcattcaccactccagactctttgcaatggagacttgtct
agctttggggtggccaagggcaaggtccactgtgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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