KEGG   Pan troglodytes (chimpanzee): 462378
Entry
462378            CDS       T01005                                 
Symbol
CDK7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr03022  Basal transcription factors
ptr03420  Nucleotide excision repair
ptr04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    462378 (CDK7)
  09124 Replication and repair
   03420 Nucleotide excision repair
    462378 (CDK7)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    462378 (CDK7)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:ptr01001]
    462378 (CDK7)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptr03021]
    462378 (CDK7)
   03019 Messenger RNA biogenesis [BR:ptr03019]
    462378 (CDK7)
   03400 DNA repair and recombination proteins [BR:ptr03400]
    462378 (CDK7)
Enzymes [BR:ptr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     462378 (CDK7)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     462378 (CDK7)
Protein kinases [BR:ptr01001]
 Serine/threonine kinases: CMGC group
  CDK family
   462378 (CDK7)
Transcription machinery [BR:ptr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     462378 (CDK7)
Messenger RNA biogenesis [BR:ptr03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     462378 (CDK7)
DNA repair and recombination proteins [BR:ptr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     462378 (CDK7)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr ABC1 Kinase-like Seadorna_VP7 Haspin_kinase APH FTA2 Pkinase_fungal
Other DBs
NCBI-GeneID: 462378
NCBI-ProteinID: XP_001160482
Ensembl: ENSPTRG00000016946
VGNC: 11877
UniProt: A0A2I3S9X0 A0A6D2WVT0
Position
4:complement(45373904..45416849)
AA seq 346 aa
MALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLM
TLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRA
PELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM
CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPG
PTPGCQLPRPNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF
NT seq 1041 nt   +upstreamnt  +downstreamnt
atggctctggacgtgaagtctcgggcaaagcgttatgagaagctggacttccttggggag
ggacagtttgccaccgtttacaaggccagagataagaataccaaccaaattgtcgccatt
aagaaaatcaaacttggacatagatcagaagctaaagatggtataaatagaaccgcctta
agagagataaaattattacaggagctaagtcatccaaatataattggtctccttgatgct
tttggacataaatctaatattagccttgtctttgattttatggaaactgatctagaggtt
ataataaaggataatagtcttgtgctgacaccatcacacatcaaagcctacatgttgatg
actcttcaaggattagaatatttacatcaacattggatcctacatagggatctgaaacca
aacaacttgttgctagatgaaaatggagttctaaaactggcagattttggcctggccaaa
tcttttgggagccccaatagagcttatacacatcaggttgtaaccagatggtatcgggcc
cctgagttactatttggagctaggatgtatggtgtaggtgtggacatgtgggctgttggc
tgtatattagcagagttacttctaagggttccttttttgccaggagattcagaccttgat
cagctaacaagaatatttgaaactttgggcacaccaactgaggaacagtggccggacatg
tgtagtcttccagattatgtgacatttaagagtttccctggaatcccgttgcatcacatc
ttcagtgcagcaggagacgacttactagatctcatacaaggcttattcttatttaatcca
tgtgctcgaattacggccacacaggcactgaaaatgaagtatttcagtaatcggccaggg
ccaacacctggatgtcagctgccaagaccaaactgtccagtggaaaccttaaaggagcaa
tcaaatccagctttggcaataaaaaggaaaagaacagaggccttagaacaaggaggattg
cccaagaaactaattttttaa

  All links  
Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (13)   
   UniProt (2)   
   RefSeq(pep) (11)   
DNA sequence (19)   
   RefSeq(nuc) (11)   
   GenBank (4)   
   EMBL (4)   
Protein domain (9)   
   Pfam (9)   
All databases (46)   

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