KEGG   Pan troglodytes (chimpanzee): 469953
Entry
469953            CDS       T01005                                 
Symbol
SDC4
Name
(RefSeq) syndecan-4
  KO
K16338  syndecan 4
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr04512  ECM-receptor interaction
ptr04514  Cell adhesion molecules
ptr04820  Cytoskeleton in muscle cells
ptr05205  Proteoglycans in cancer
ptr05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    469953 (SDC4)
   04514 Cell adhesion molecules
    469953 (SDC4)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    469953 (SDC4)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    469953 (SDC4)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    469953 (SDC4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:ptr00535]
    469953 (SDC4)
Proteoglycans [BR:ptr00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   469953 (SDC4)
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 469953
NCBI-ProteinID: XP_525337
Ensembl: ENSPTRG00000049711
VGNC: 6260
UniProt: H2QKF4 A0A6D2Y2J9
Position
20:complement(44896492..44919634)
AA seq 198 aa
MAPARLFALLLLFVGGLAESIRETEVIDPQDLLEGRYFSGALPDDEDVVGPGQESDDFEL
SGSGDLDDLEDSMIGPEVIHPLVPLDNHIPERAGSGSQVPTEPKKLEENEVIPKRISPIE
ESEDVSNKVSMSSTVQGSNIFERTEVLAALIVGGIVGILFAVFLILLLMYRMKKKDEGSY
DLGKKPIYKKAPTNEFYA
NT seq 597 nt   +upstreamnt  +downstreamnt
atggcccccgcccgtctgttcgcgctgctgctgctcttcgtaggcggactcgccgagtcg
atccgagagactgaggtcattgacccccaggacctcctagaaggccgatacttctccgga
gccctaccagacgatgaggatgtagtggggcccgggcaggaatctgatgactttgagctg
tctggctctggagatctggatgacttggaagactccatgatcggccctgaagttatccat
cccttggtgcctctagataaccacatccctgagagggcagggtctgggagccaagtcccc
accgaacccaagaaactggaggagaatgaggttatccccaagagaatctcacccattgaa
gagagtgaggatgtgtccaacaaagtgtcaatgtccagcactgtgcagggcagcaacatc
tttgagagaacggaggtcctggcagctctgattgtgggtggcatcgtgggcatcctcttt
gccgtcttcctgatcctactgctcatgtaccgtatgaagaagaaggatgaaggcagctat
gacctgggcaagaaacccatctacaagaaagcccccaccaatgagttctacgcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

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