KEGG T01005: 470450

Pan troglodytes (chimpanzee): 470450

Entry

470450            CDS       T01005

Symbol

AFF3

Name

(RefSeq) AF4/FMR2 family member 3 isoform X2

K15195

AF4/FMR2 family member 3

Organism

ptr Pan troglodytes (chimpanzee)

Brite

KEGG Orthology (KO) [BR:ptr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptr03021]
    470450 (AFF3)
Transcription machinery [BR:ptr03021]
Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     470450 (AFF3)

SSDB

Motif

Pfam:

AF-4 AFF4_CHD AF4_int

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

VGNC:

Position

12:22792867..23390100

AA seq 1250 aa
MDSFDLALLQEWDLESLWGEDILNQRNDSLVVEFQSSASRCRSVYEPDRNALRRKERERR
NQETQQDDGTFNSSYSLFSEPYKTNKGDELSNRIQNTLGNYDEMKDFLTDRSNQSHLVGV
PKPGVPQTPVNKIDEHFVAESRAQTQPSSICSTTTSTPAAVPVQQSKRGTMGWQKAGHPP
SDGQQRATQQGSLRTLLGDGVGRQQPRAKQVCNVEVGLQTQERPPAMAAKHSSSGHCVQN
FPPSLASKPSLVQQKPTAYVRPMDGQDQAPDESPKLKSSSETSVHCTSYRGVPASKPEPA
RAKAKLSKFSIPKQGEETRSGETNSCVEEIIREMTWLPPLSAIQAPGKVEPTKFPFPNKD
SQLVSSGHNNPKKGDAEPESPDNGTSNTSMLEDDLKLSSDEEENEQAAQRTALRALSDSA
VVQQPNCRTSVPSSKGSSSSSSSGSSSSSSDSESSSGSDSETESSSSESEGSKPPHFSSP
EAEPASSNKWQLDKWLNKVNPHKPPILIQNESHGPESNQYYNPVKEDVQDCGKVPDVCQP
SLREKEIKSTCKEEQRPRTANKAPGSKGVKQKSPPAAVAVAVSAAAPPPAVPCAPAENAP
APARRSAGKKPTRRTERTSAGDGANCHRPEEPAAADALGTSVVVPQEPTKTRPCGNNRAS
HRKELRSSVTCEKRRTRGLSRIVPKSKEFIETESSSSSSSSDSDLESEQEEYPLSKAQTV
AASASSGNDQRLKEAAANGGNGPRAPVGSINARTTSDIAKELEEQFYTLVPFGRNELLSP
LKDSDEIRSLWVKIDLTLLSRIPEHLPQEPGVLSAPATKDSESAPPSHTSDTPAEKALPK
SKRKRKCDNEDDYREIKKSQGEKDSSSRLATSTSNTLSANHCNMNINSVAIPINKNEKML
RSPISPLSDASKHKYTSEDLTSSSRPNGNSLFTSASSSKKPKADSQLQPHGGDLTKAAHN
NSENIPLHKSRPQTEPWSPGSNGHRDCKRQKLVFDDMPRSADYFMQEAKRMKHKADAMVE
KFGKALNYAEAALSFIECGNAMEQGPMESKSPYTMYSETVELIRYAMRLKTHSGPNATPE
DKQLAALCYRCLALLYWRMFRLKRDHAVKYSKALIDYFKNSSKAAQAPSPWGASGKSTGT
PSPMSPNPSPASSVGSQGSLSNASALSPSTIVSIPQRIHQMAANHVSITNSILHSYDYWE
MADNLAKENREFFNDLDLLMGPVTLHSSMEHLVQYSQQGLHWLRNSAHLS

NT seq 3753 nt +upstreamnt +downstreamnt
atggacagcttcgacttagccctgctccaggaatgggacctcgagtcactgtggggtgaa
gacatcttaaaccagaggaatgactctctagttgtggaatttcagtcatcagccagcaga
tgcaggagtgtctatgaaccagatagaaatgcattacggaggaaagaacgagaaagaaga
aatcaagaaactcaacaggatgacggcacgtttaattctagttactctctcttcagtgag
ccctacaagactaacaagggggatgaactctccaaccggatccagaacactttaggcaat
tatgatgaaatgaaagactttttaactgatagatccaatcagagtcatctcgttggagtt
cccaaacctggggttcctcagactcctgtgaacaagatcgatgaacattttgttgcagag
tcaagagcccagacccagccctcgtctatctgtagcactacaacttccacaccagcagct
gtccccgtgcagcagagtaagagaggcactatgggctggcagaaggctgggcacccaccc
tccgatggccaacagagagcaacacaacagggctctctcaggaccttgcttggagatggt
gttggcagacagcagccgcgggccaaacaagtgtgcaatgtggaggtgggccttcagacc
caggagaggccacctgccatggcggccaagcacagcagcagcggacactgtgttcagaac
tttcctccatccctagcttcaaaacccagcctggtccagcagaaaccgaccgcatatgtg
cggccgatggacggccaagatcaggcccctgatgagtctcctaagctgaagtcgtcttcg
gaaaccagcgtgcactgcacatcatacaggggagtccctgccagcaagccggagcctgcc
agagccaaggccaagctctccaagttcagcatccccaagcagggggaggagactagatct
ggagaaaccaacagctgtgttgaagaaataatccgggagatgacctggcttccaccactt
tctgctattcaagcacctggcaaagtggaaccaaccaaatttccatttccaaataaggac
tctcagcttgtatcctctggacacaataatccaaagaaaggtgatgcagagccagagagt
ccagacaatggcacatcgaatacatcaatgctggaagatgaccttaagctaagcagtgat
gaagaggagaatgaacaggcagctcagagaacggctctccgcgctctctctgacagcgcc
gtggtccagcagcccaactgcagaacctcggtgccttccagcaagggcagcagcagcagc
agcagcagcggcagcagcagctcctccagcgactcagagagcagctccggatctgactcg
gagaccgagagcagctccagcgagagtgagggcagcaagcccccccacttctccagcccc
gaggctgaaccggcatcctctaacaagtggcagctggataaatggctaaacaaagttaat
ccccacaagcctcctattctgatccaaaatgaaagccacgggccagagagcaatcagtac
tacaacccggtgaaagaggacgtccaggactgtgggaaagtccccgacgtttgccagccc
agcctgagagagaaggagatcaagagcacttgcaaggaggagcagaggccaaggacagcc
aacaaggcccctgggagtaaaggcgtgaagcagaagtccccgcccgcggccgtggccgtg
gcggtgagcgcagccgccccgccacccgcagtgccctgtgcgcccgcggagaacgcgccc
gcgcctgcccggaggtccgcgggcaagaagcccaccaggcgcaccgagaggacctcagct
ggggacggcgccaactgccaccggcccgaggagcccgcggccgcggacgcgctggggacg
agcgtggtggtcccccaggagcccaccaaaaccaggccctgtggcaacaacagagcgagc
caccgcaaggagctgcgctcctccgtgacctgcgagaagcgccgcacgcgggggctaagc
aggatcgtccccaaatccaaggagttcattgagacagagtcgtcatcttcgtcctcctcc
tcggactccgacctggagtccgagcaggaggagtaccctctgtccaaagcacagaccgtg
gctgcctctgcctcctccgggaatgatcagaggctgaaggaggccgctgccaacgggggc
aatggtcctagggcccctgtaggctccatcaacgccaggaccaccagtgacatcgcgaag
gagctggaggagcagttctacacactggtcccctttggccggaacgaacttctctcccct
ctaaaggacagtgatgagatcaggtctctctgggtcaaaatcgacctgaccctcctgtcc
aggatcccagaacacctgccccaggagccaggggtattgagcgcccctgccaccaaggac
tctgagagcgcaccgcccagccacacctcggacacacctgcagaaaaggctttgccaaaa
tccaagaggaaacgcaagtgtgacaacgaagacgactacagggagatcaagaagtcccag
ggagagaaagacagctcttcaagactggccacctccaccagtaatactttgtctgcaaac
cactgcaacatgaacatcaacagtgtggcaataccaataaataaaaatgaaaaaatgctt
cggtcgcccatctcacccctctccgatgcatctaaacacaaatacaccagcgaggactta
acttcttccagccgacctaatggcaacagtttgtttacttcagcctcttccagcaaaaag
cctaaggccgacagccagctgcagcctcacggcggagacctcacgaaagcagctcacaac
aattccgaaaacattcccctccacaagtcacggccgcagacggagccgtggtctccaggc
tccaacggccacagggactgcaagaggcagaaacttgtcttcgatgatatgcctcgcagt
gccgattattttatgcaagaagctaaacgaatgaagcataaagcagatgcaatggtggaa
aagtttggaaaggctttgaactatgctgaagcagcattgtcgtttatcgagtgtggaaat
gcaatggaacaaggccccatggaatccaaatctccttatacgatgtattcagaaacagta
gagctcatcaggtatgctatgagactaaaaacccactcaggccccaatgccacaccagaa
gacaaacaactggctgcattatgttaccgatgcctggccctcctgtactggcggatgttt
cgactcaaaagggaccacgctgtaaagtattcaaaagcactcatcgactatttcaagaac
tcatctaaagccgcccaagccccatctccgtggggggccagtggaaagagcactggaacc
ccatcccccatgtctcccaacccctctcccgccagctccgtggggtctcagggcagcctc
tccaacgccagcgccctgtccccgtcgaccatcgtcagcatcccacagcgcatccaccag
atggcggccaaccacgtcagcatcaccaacagcatcctgcacagctatgactactgggag
atggccgacaacctggccaaggaaaaccgagaattcttcaacgacctggatctgctcatg
gggccggtcaccctgcacagcagcatggagcacctggtccagtactcccaacagggcctg
cactggctgcggaacagcgcccacctgtcatag

All links

Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (14)   
   RefSeq(pep) (14)   
DNA sequence (16)   
   RefSeq(nuc) (14)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (38)   

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