KEGG   Paraburkholderia tropica: G5S35_28385
Entry
G5S35_28385       CDS       T07044                                 
Name
(GenBank) cysteine desulfurase
  KO
K11717  cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
Organism
ptro  Paraburkholderia tropica
Pathway
ptro00450  Selenocompound metabolism
ptro01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ptro00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    G5S35_28385
Enzymes [BR:ptro01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.7  cysteine desulfurase
     G5S35_28385
 4. Lyases
  4.4  Carbon-sulfur lyases
   4.4.1  Carbon-sulfur lyases (only sub-subclass identified to date)
    4.4.1.16  selenocysteine lyase
     G5S35_28385
SSDB
Motif
Pfam: Aminotran_5 Aminotran_1_2 Beta_elim_lyase Cys_Met_Meta_PP DegT_DnrJ_EryC1 SelA
Other DBs
NCBI-ProteinID: QNB15515
Position
C:1104970..1107015
AA seq 681 aa
MTIPTPTVNPAAVEHPPLPGGLPDPATLASLANAFFSALPGGKSGVSAPVVASPDVSAGS
GATGGLPSALPAAAPILASVSNPAPAGSPLAGPGGTGTGVPGFAPPQGKAPGLNLAPSAP
THVLSLGNRAPALAPHAAAANGLPDSAVSIAPALEPRAGGALLGVPPVQEAASPTHAPPA
TPAATGPSPFYFLHGAQNGWHGRAQDIDVPVHGHGQGQASPQAFGLPGGDVLRDLVVFEP
RSVGVPNVSGVSGESARYFVDEREAAVPHGLKSSAHPPFDVNAVRRDFPILQERVNGKPL
IWFDNAATTHKPQAVIDRLAYFYAHENSNIHRAAHALAARATDAYEHARKTVQRFINASS
PDEIVFVRGTTEAINLVAKSWGAQNVGEGDEIIVSHLEHHANIVPWQQLAAQKGARLRVI
PVDDSGQVLLDDYRKLLSDRTKIVSVTQVSNALGTVVPVREIVELAHRAGAKALVDGAQS
ISHMRVDVQALDADFFVFSGHKIYGPTGIGVVYGKREVLEAMPPWQGGGNMIEDVTFERT
VFHGPPARFEAGTGNIADAVGLGAALDYVSRIGIENIARYEHDLLGYATSVLAPVAGVRL
VGTARDKASVLSFVLKGYTTAEVGQALSEEGIAVRAGHHCAQPILRRFGLEASVRPSLAF
YNTCDEVDALVAVVRRLASRR
NT seq 2046 nt   +upstreamnt  +downstreamnt
atgactatcccgacacctaccgttaatcccgcggccgtcgagcatccgccgttgccgggc
ggcttgccggaccccgcgacgctggcgagtctcgcgaacgcgttcttcagcgcgctgccg
ggcggtaagagcggtgtgtcagcgcccgttgtcgcgagtcccgatgtatccgcgggcagc
ggcgcgacgggcggcttgccgtcggcgctgccggctgcggcgccgatcctcgcgtcggtc
agcaatcccgcgccggccggttcgccgctggcgggaccgggcggcacgggcacgggcgtg
cccggcttcgcgccgccgcaaggcaaggcgccggggctgaatctcgcgccgtccgcgccc
acgcacgtgctctcgctcggcaatcgcgcacccgcgctcgcgccgcatgcggccgctgca
aacgggctgccggattccgccgtgtcgattgcgccggcgctcgaaccgcgtgcgggcgga
gcgctgctcggcgtgccgccggttcaggaggcggcaagcccgacgcacgcaccgcccgct
acgcctgccgccacgggaccgtcgccgttctattttctgcacggcgcgcagaacggctgg
cacgggcgggcgcaggacatcgacgtgcccgttcatggtcacggccaaggacaggcttcg
ccgcaagcgttcggtctgcccggcggcgacgtgttgcgcgatctcgtcgtgttcgaaccg
cgcagtgtgggcgtacccaatgtgagcggagtaagcggcgaaagcgcgcgctatttcgtc
gacgagcgcgaggcggccgtgccgcacggtctgaagtcgtccgcgcatccgccgttcgat
gtgaacgccgtgcgccgcgatttcccgatcttgcaggagcgcgtgaacggcaagccgctg
atctggttcgataacgcggcgacgacgcacaagccgcaagccgtgatcgaccggctcgcc
tatttctacgcgcacgagaactcgaacatccatcgcgccgcgcatgccctcgcggcacgc
gcaaccgatgcctacgagcatgcgcgcaagaccgtgcagcgcttcatcaacgcgtcgtcg
ccggatgagattgtgttcgtgcgcggcaccaccgaggcgatcaacctcgtggcgaaaagc
tggggcgcgcagaacgtgggcgagggcgacgagatcatcgtctcgcacctggagcatcac
gcgaacatcgtgccgtggcagcaactggccgcgcagaagggcgcgcgtctgcgcgtgatt
cccgtcgacgattccggccaggtgctgctcgacgactaccgcaagctgctcagcgatcgt
acgaaaatcgtgtcggtcacgcaggtgtcgaatgcgttggggacggtggtgccggtgcgc
gagatcgtcgagctggcgcatcgcgcgggcgcgaaggcgctcgtggacggcgcccagtcg
atctcgcacatgcgcgtggacgtgcaggcgctcgacgcggacttcttcgtgttctcgggc
cacaagatctacggtccgaccggcatcggcgtggtgtacggcaagcgcgaggtgctcgaa
gcgatgccgccgtggcagggcggcggcaacatgatcgaggacgtgaccttcgagcgcacg
gtgtttcatgggccgcccgcgcgcttcgaggcgggcaccggcaatatcgccgatgcggtg
gggctgggcgcggcgctcgactacgtgagccgtatcggcatcgagaatatcgcgcgctac
gagcacgatctgctcggctacgcgacgagcgtgctcgcgcccgttgccggcgtgcgactc
gtaggcaccgcgcgcgacaaggccagtgtgctgtcgttcgtgctgaagggctacacgacg
gcggaagtggggcaggcgctcagcgaagaaggtatcgcggtgcgcgcgggccatcattgc
gcgcagccgatcctgcggcgcttcggtctcgaagcgagcgtgcgtccgtcgctcgcgttc
tacaacacctgcgatgaagttgatgcgctggtggcggtcgtgaggcggctcgcgtcgcgc
cgttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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