KEGG   Pseudomonas trivialis: AA957_19880
Entry
AA957_19880       CDS       T04006                                 
Name
(GenBank) ssDNA exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ptv  Pseudomonas trivialis
Pathway
ptv03410  Base excision repair
ptv03430  Mismatch repair
ptv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ptv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AA957_19880
   03430 Mismatch repair
    AA957_19880
   03440 Homologous recombination
    AA957_19880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ptv03400]
    AA957_19880
DNA repair and recombination proteins [BR:ptv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     AA957_19880
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     AA957_19880
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      AA957_19880
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1
Other DBs
NCBI-ProteinID: AKS08289
UniProt: A0A0H5AB36
Position
4394784..4396493
AA seq 569 aa
MRIDPRPLPAVLPFLGDLPPLLTRLYAARGVQSEAELDKSLARLIPYQQLKGIDAAVDLL
VTALEQRQRILIVGDFDADGATASTVGTLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVAV
ALQREPQLLITVDNGISSVEGVAAAKAAGLQVLVTDHHLPGDELPAADAIVNPNQPGCEF
PSKALAGVGVIFYVLMALRARLRSLGWYENTPQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGIKAILEVAKRDAARITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLTTDFAAAREMAAQLDGMNQDRKSIEQGMQREALAQLKDLPVESMPYGLCLFDPEWHQG
VIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVQGFHIRDALAVVASQHPNLIAKYGG
HAMAAGLTLPEANFPLFAEAFDAEVRRQLCEEDLTGRLLTDGTLAVEEFHLELARALRHA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSVKLDGIAFGVDREVWPNPTVR
WVELAYKLDVNEFRGNETVQLMIAHIEPR
NT seq 1710 nt   +upstreamnt  +downstreamnt
atgcgtatcgatcctcgcccattgcccgctgtcctgccgttcctcggagatttgccaccg
ctgttgacccgtctctacgccgcacgcggggtacagtcggaagccgagctggataaaagc
ctggcgcggttgatcccttaccagcagctcaagggcatcgacgcggcggtggacctgctg
gtgacggcgctggagcaacgccagcgtatcctgatcgttggcgacttcgacgctgatggc
gccaccgccagcaccgtaggcaccttgggcctgcgtttgctcggggcggcgcatgtcgat
tacctggtgcccaaccgtttcgaatacggctacggcctgaccccggaaatcgtcgccgtg
gccctgcagcgcgagccgcagttgctgatcaccgtggacaacggcatctccagcgtcgaa
ggcgtggcggcggcgaaagcggcggggctgcaggtgctggtgaccgaccaccatttgccc
ggcgatgaattgccggctgcggatgccatcgtcaacccgaaccagccaggctgtgagttt
ccgagcaaggccctggccggcgtcggtgtgatcttttatgtgctgatggccctgcgtgcg
cgcctgcgcagcttgggctggtacgagaacacgccgcagccgaacatcggcgagttgctc
gacctggtcgcgctgggcagcgtcgccgacgtggtgcccttggacgccaataaccgcatc
ctggtgcatcaaggcctggagcgtatccgcgccggtcgcgcgcggccggggatcaaggca
atcctggaagtggccaagcgcgacgccgcacgcatcacctcgaccgacctgggctttatc
ctcgggccgcgcctgaacgccgctgggcgcctggatgacatgagcctgggtatcgaatgc
ctgctcaccaccgactttgccgccgcgcgtgaaatggccgcgcaactggacggcatgaac
caggaccgcaaatccatcgagcaaggcatgcagcgcgaggccctggcccagctcaaggac
ttgccggtggagtcgatgccctacggtttgtgcctgttcgacccggaatggcaccagggc
gtgatcgggattctcgcgtcgcgcatgaaagagcgttacttccgcccgaccatcgccttc
gccgacgccggtgacggcctgctcaagggctcagggcgctccgtgcagggttttcatatc
cgtgatgccctggcggtggttgcgagccagcatcccaacctgatcgccaaatacggcggc
cacgccatggcggcggggctgacattgcccgaggcgaatttcccactgtttgccgaagcc
tttgatgctgaagtgcgccggcagctgtgtgaggaagacttgaccggcaggttgttgacc
gacggtaccctggcagtggaagagtttcacctggagctggcgcgcgccttacggcatgcc
ggcccatgggggcagcactttccagagccgctgtttcacggtgtgtttcagttggtggag
cagcgtgtcgtgggggagcggcacctgaaagtggtgctcaagagcgaatgcgggtcggtg
aagctcgatggcattgcgtttggggtggaccgtgaggtctggcctaacccgaccgtgcgt
tgggtggagttggcctacaagctggatgtgaacgagtttcgtgggaatgaaaccgtgcag
ttgatgattgcgcacatcgaaccgcgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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