KEGG   Pandoraea thiooxydans: ABW99_18165
Entry
ABW99_18165       CDS       T03947                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
ptx  Pandoraea thiooxydans
Pathway
ptx03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ptx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ABW99_18165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptx03021]
    ABW99_18165
   03400 DNA repair and recombination proteins [BR:ptx03400]
    ABW99_18165
Enzymes [BR:ptx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     ABW99_18165
Transcription machinery [BR:ptx03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     ABW99_18165
DNA repair and recombination proteins [BR:ptx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      ABW99_18165
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RNA_pol_L_2 RAD51D_N
Other DBs
NCBI-ProteinID: AKJ69843
UniProt: A0A0G3ERX6
Position
258850..259827
AA seq 325 aa
MQTSLLKPKIIAVEPIGEHHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTIDGVQEDVVNFLLNLKGAVFKLHNRDEVTVALRKEGEGVVRAGDIEVPHDVEI
INPDHVIAHLAKGGKLDVQIKVERGRGYVPGNVRRYGDDSAKIIGRIVLDASFSPVQRVS
YAVESARVEQRTDLDKLVMNIETNGVVSPEEAIRQSARILVDQLSVFAALEGTEAASEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLEK
NT seq 978 nt   +upstreamnt  +downstreamnt
atgcaaaccagtttgttgaaacccaagatcattgcggttgagccgatcggtgaacatcac
gccaaagtcgtgatggaaccgttcgaacgcggttacggccacaccttggggaacgcgttg
cgccgcgtgctgttgtcatcgatggtcggttatgcccctaccgaggtcacgatcgccggt
gtggtgcatgaatactccaccatcgacggtgtgcaagaggatgtagtcaatttcctgttg
aaccttaagggtgcggtattcaaactgcacaatcgcgacgaagtaaccgtcgcgttgcgc
aaggaaggtgaaggcgtggtacgcgccggcgatatcgaagtaccccacgatgtcgaaatc
atcaaccccgatcacgtgattgctcacttggccaagggtggaaagctcgacgttcagatc
aaggtcgaacgtggtcgcggctacgtgccgggtaatgtgcgtcgctacggcgatgacagc
gccaagattatcgggcgcattgtgctggacgcttcgttctcgcccgtgcaacgtgtgagc
tatgcggtcgaaagcgcgcgcgtcgaacagcgtactgacctggacaagttggtcatgaat
atcgagaccaacggtgttgtttcgccggaagaggcgattcgtcaatccgcccgcatcctg
gtcgaccagttgtccgtatttgccgcattggaaggtacggaagccgccagcgaagcgccg
tcgcgggctccgcagatcgacccgattctgttgcgtccggtggatgacctcgagttgact
gtccgttcggccaattgcttgaaggcggaaaacatttactatattggcgatctgatccag
cgcactgagaatgagctgctcaaaacgccgaaccttgggcggaaatcgctcaacgaaatc
aaggaagtgcttgcctcgcgcggcttgaccttgggcatgaagctcgaaaattggccaccc
gcagggttggaaaagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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