KEGG   Candidatus Pelagibacter ubique: SAR11_1159
Entry
SAR11_1159        CDS       T00257                                 
Symbol
nrdA
Name
(GenBank) ribonucleoside-diphosphate reductase alpha chain
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
pub  Candidatus Pelagibacter ubique
Pathway
pub00230  Purine metabolism
pub00240  Pyrimidine metabolism
pub01100  Metabolic pathways
pub01232  Nucleotide metabolism
Module
pub_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
pub_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:pub00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    SAR11_1159 (nrdA)
   00240 Pyrimidine metabolism
    SAR11_1159 (nrdA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pub03400]
    SAR11_1159 (nrdA)
Enzymes [BR:pub01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     SAR11_1159 (nrdA)
DNA repair and recombination proteins [BR:pub03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    SAR11_1159 (nrdA)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: AAZ21962
UniProt: Q4FLH6
Position
complement(1113630..1115567)
AA seq 645 aa
MNKILSQALKKAVSEYSPNNSELSKSKGPDLFSLSNDTELFQNEKGIIIKIDRTRDSKLT
DFGKATLKDRYLGQNESFQDLFARVASSYADDNLHAQRIYNYISNLWFMPATPVLSNGGT
KRGLPISCFLNEASDSLNGILDLWSENVWLAAKGGGIGSYWGNLRSIGEKIGKVGKTSGI
IPFIKVMDSLTMAISQGSLRRGSAACYLPIEHPEIEEFIEMRRPTGGDPNRKALNLHHGV
LVSDAFMRAVETDEQWALKSPADGTVQQTISARNLWIRLLTARIETGEPYIIYIDTVNRQ
IPQHHKLANLTVKTSNLCSEITLPTGIDKNGRDRTAVCCLSSLNLEKYDEWKDDNVMIND
VMRFLDNVLTDFIERAPEQFDDAKYSAEKERSVGLGVMGFHSYLQKHSIPLESVMSKAWN
KKIFKHIQEHVDQASKDLADERGACPDAADYGYNERFSNKTAIAPTASISIICGGASPGV
EPVAANSYTHKTLSGSFNVRNRYLVELLEKHGKNTDDVWSGITTNQGSVSHLDFLTDLEK
DVFKTAFELDQKWIIELSGDRTPYISQAQSINLFVPADIHKRELHKIHFDAWKKGLKSLY
YCRSKSIQRAENVNDTKATDVNANVYKSKPQTTEQPEYEECLSCQ
NT seq 1938 nt   +upstreamnt  +downstreamnt
atgaacaaaatactatcacaggcactcaagaaagctgtctccgaatatagcccaaataat
agcgaactttcaaagagcaaaggtccagatttattttcacttagcaatgatacagaactt
tttcaaaatgaaaaaggtataattattaaaattgatagaacaagagattcaaaattaact
gactttggtaaagcaactttaaaagatagatacttaggtcaaaacgaatcttttcaagat
ttatttgctcgtgttgcaagttcatatgcagatgacaatttacatgcacaaagaatttat
aactacattagtaatttatggtttatgccagcaactccagttttatcaaatggtggaact
aaaagaggtttgccaatttcatgttttttaaatgaagcatcagacagtttaaatggaata
cttgatctatggagtgagaacgtttggttagctgctaaaggtggtgggattggaagttac
tggggtaaccttagatctattggagaaaaaattggtaaagttggaaagacatcaggaata
attcctttcatcaaagtaatggactcgttaacgatggcaattagtcaaggttcattaaga
agaggatctgctgcttgttatcttccaattgagcatcctgaaattgaagagtttattgaa
atgagaagacccacaggtggagatccaaatagaaaagcattaaaccttcatcatggtgtt
ttagtatcagatgcatttatgagagctgttgaaacagatgagcaatgggcattaaaaagt
cctgcagatggaactgtacaacaaactatctctgcaagaaatttatggattagattatta
actgcaagaattgaaacaggtgagccttatataatctatatcgatacagtgaatagacaa
attccacaacaccataaattagcaaatctaactgttaaaacttctaacctttgtagtgaa
atcacattacctacaggaatagataaaaatggcagagatagaactgctgtttgttgttta
tcatctttaaacttagaaaagtatgatgagtggaaagacgacaacgttatgattaacgat
gttatgagatttttagataacgtattaactgattttattgaaagagctccagagcaattt
gatgatgcaaaatattctgctgaaaaagaaagaagtgttggcctaggtgttatgggtttc
cattcttacttacaaaagcatagtattccacttgagtcagttatgagtaaagcttggaat
aaaaagatattcaaacatattcaagaacacgtagatcaagcctcaaaagatttagctgat
gaaagaggagcttgtccagatgctgcagattatggttataatgaaagattttctaacaaa
actgcgattgcacctacagcttctatttctattatctgtggtggagcatcccctggagta
gagccagttgcagcaaatagttacacgcacaaaactttatctggatcatttaatgttaga
aacagatacttagtagaattattagaaaaacatgggaaaaatactgatgatgtttggtct
ggtattacaacaaatcaagggtccgtttctcatttagattttttaactgatttagaaaaa
gatgttttcaaaactgcttttgagttggatcaaaaatggattattgaattaagtggagat
agaacgccgtatatatctcaagctcaatcaattaacttattcgtgccagctgatattcac
aaaagagaattgcacaaaattcattttgatgcttggaaaaaaggtttaaagagcctttat
tactgtagatcaaaatcaattcaacgtgcggaaaatgttaatgacactaaagcaacagat
gttaacgcaaatgtttacaaatcaaaaccacaaacaactgaacaaccagaatacgaggag
tgcctatcatgtcagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2124)   
   KEGG ORTHOLOGY (1)   
   RefGene (2121)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (2153)   

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