KEGG   Paenarthrobacter ureafaciens: FV140_19530
Entry
FV140_19530       CDS       T06726                                 
Name
(GenBank) integration host factor
  KO
K03530  DNA-binding protein HU-beta
Organism
pue  Paenarthrobacter ureafaciens
Brite
KEGG Orthology (KO) [BR:pue00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pue03032]
    FV140_19530
   03036 Chromosome and associated proteins [BR:pue03036]
    FV140_19530
   03400 DNA repair and recombination proteins [BR:pue03400]
    FV140_19530
DNA replication proteins [BR:pue03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    FV140_19530
Chromosome and associated proteins [BR:pue03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    FV140_19530
DNA repair and recombination proteins [BR:pue03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      FV140_19530
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: QMU84026
Position
complement(4174049..4174336)
AA seq 95 aa
MAKNRSELVAEVAGKAGTSQAAVNSVLDALFEVFETSVAAGEKITIPGWLAVERTDRAAR
TGRNPQTGETIQIAAGHSVKLTAGSKLKAAVAKKK
NT seq 288 nt   +upstreamnt  +downstreamnt
atggctaagaaccgtagtgaactcgttgcagaggtagcaggcaaggccggcaccagccag
gcagccgtcaactccgtgctcgatgcactgttcgaagttttcgagacttctgttgctgca
ggcgagaagatcaccatcccgggctggctcgcagttgagcgcaccgaccgcgcagcacgc
accggccgtaacccgcagaccggcgaaacgatccagatcgcagccggccacagcgtcaag
ctgaccgcaggctccaagctgaaggctgctgtcgccaagaagaagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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