KEGG   Pasteurella multocida subsp. multocida 3480: NT08PM_1475
Entry
NT08PM_1475       CDS       T02057                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
pul  Pasteurella multocida subsp. multocida 3480
Pathway
pul03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NT08PM_1475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pul03021]
    NT08PM_1475
   03019 Messenger RNA biogenesis [BR:pul03019]
    NT08PM_1475
Transcription machinery [BR:pul03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     NT08PM_1475
Messenger RNA biogenesis [BR:pul03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     NT08PM_1475
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT AAA AAA_22 AAA_25
Other DBs
NCBI-ProteinID: AFI46591
Position
1540538..1541800
AA seq 420 aa
MHLTELKNRPVSELVELGEGQMGLENLARLRKQDIVFAILKQHAKSGEDIFGGGVLEILP
DGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLQTGDKIEGKIRPPKEGERYFALLKVDQV
NDDRPEVSRSKILFENLTPLHANSRLRMERGNGSTEDLTARILDLASPIGKGQRGLIVAP
PKAGKTMLLQNIAQSITYNYPECELIVLLIDERPEEVTEMQRSVKGEVIASTFDEPATRH
VQVAEMVIEKAKRSVEHKKDVVILLDSITRLARAYNTVTPASGKILSGGVDANALHRPKR
FFGAARNVEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNMELHLSRKIAEKRVFPAID
FNRSGTRKEDLLTSPDELQKMWILRKILHPMGEVEAMEFLIDKLMVAKTNDEFFEMMKRS
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgcatcttacagaacttaaaaatagacccgtttctgaattagtggaactcggtgaaggt
caaatgggcttagaaaatctagctcgcctacgcaaacaagacattgtcttcgcaatctta
aaacaacacgctaaaagcggtgaggacatctttggtggtggtgtgttagaaattctaccc
gatggtttcggtttcttacgctccgctgacagttcctaccttgccggccctgatgatatc
tatgtttcaccaagtcaaatccgtcgtttcaacttacaaacaggtgataaaattgaaggt
aaaattcgtccacctaaagaaggtgaacgttattttgcgttattaaaagtcgatcaagtc
aatgacgaccgacctgaagtgtcccgtagcaagattttattcgaaaacttaaccccttta
catgcgaactctcgtctcagaatggagcgaggtaacggctcaacggaagatttaactgcc
cgcattttggatttagcttccccgattggtaaaggacaacgtggtttgattgtggcacca
cccaaagccggtaaaaccatgttgttacaaaacatcgcacaaagcattacttacaattac
cctgaatgtgaattgatcgtgttattaattgacgaacgtccagaagaagtgactgaaatg
caacgttcggttaaaggtgaagtgattgcttcgacctttgatgaacccgcaactcgccac
gtacaagtcgctgaaatggtgattgagaaagcaaaacgttctgttgagcataaaaaagac
gtggtgatcctccttgactcaattacacgtttggcacgtgcttataacaccgtcactccg
gcatcaggcaaaattctttctggtggtgtggatgctaatgcgttacaccgtccaaaacgt
ttcttcggtgcggcacgtaatgttgaagaaggtggtagcttaaccattatcgccacagca
ctcgtagatacgggctcaaaaatggacgaagttatctttgaagagttcaaaggaaccggt
aatatggaattgcatctttcgcgcaaaattgccgaaaaacgcgttttcccagccattgac
ttcaaccgttcaggcacccgtaaagaagatttactcacaagcccagatgaactacaaaaa
atgtggatcctacgtaaaattttacatccaatgggcgaagtggaagcgatggagttcctc
attgataaactcatggtcgccaaaaccaacgatgagttttttgaaatgatgaaacgttca
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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