KEGG   Pseudomonas viridiflava: CFBP1590_0797
Entry
CFBP1590_0797     CDS       T06554                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pvd  Pseudomonas viridiflava
Pathway
pvd00740  Riboflavin metabolism
pvd01100  Metabolic pathways
pvd01110  Biosynthesis of secondary metabolites
pvd01240  Biosynthesis of cofactors
pvd02024  Quorum sensing
Module
pvd_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pvd00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    CFBP1590_0797 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CFBP1590_0797 (ribD)
Enzymes [BR:pvd01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     CFBP1590_0797 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     CFBP1590_0797 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam STAS
Other DBs
NCBI-ProteinID: SMS08383
UniProt: A0A1Y6JJ81
Position
I:742126..743271
AA seq 381 aa
MSALLTEQAALDVHYMARALELARKGLYSTHPNPRVGCVIVREGQIVGEGWHALAGEPHA
EVHALRQAGEQARGATAYVTLEPCSHHGRTPPCADALVNAGVTRVVASVQDPNPEVAGRG
LLRLMTAGIAVQCGVLEAEARALNKGFIKRMETGQPYVRVKLAMSLDGRTAMASGESQWI
TGPEARSAVQRLRAQSSVVLTGADTVLADKARLTVRPDELGLNAELTALAAARAPLRVLI
DGRLRVPLDAPFFQAGSALVATCAAASARGRYHDEGHEIVAMADSAGHVDLRKLLTELGT
RGVNEVLVEAGPRLAGAFTRLGLVDEFQIFIAGKFLGSSARPLLDLPLAQMSEALELKIV
EMRAVGNDWRVIALPVPVPGV
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgagtgcattgctgactgaacaggctgctctggacgttcattacatggcccgggcgctg
gaactggcgcgaaaagggctgtattccacgcaccccaaccctcgggtcggttgcgtgatc
gtgcgggaaggacagatcgtcggcgagggctggcatgcccttgctggcgagcctcatgcc
gaagtccatgcgttgcgtcaggctggcgaacaggccagaggcgcaaccgcctacgtcacc
cttgagccgtgcagccaccatggtcgtacgccgccctgcgccgatgcgctggtgaatgcc
ggggtcacacgggtcgtggcgtccgtgcaggaccccaacccggaggtggccggtcgtggc
ttgctgcgattgatgaccgcaggcattgcagtccagtgcggcgtgctcgaagccgaagcg
cgtgccctgaacaagggctttatcaagcgcatggaaaccggccagccttatgtgcgggtc
aagctggcgatgagtctggatggccgcacggccatggccagcggtgaaagccagtggatt
acaggtcccgaagcgcgctctgcggttcagcgtctgcgggcgcaatcgagtgtggtgctg
accggtgccgataccgtgctggccgacaaggcccgcctgaccgtgcgcccggacgagctg
ggcctgaacgctgagttgactgcattggcggcggctcgtgcaccactgcgtgtattgatc
gacggccgtctgcgcgtgccgctcgacgcgccattctttcaggcaggcagtgcgctggtc
gccacctgcgccgcagcgtcggcccggggtcgttatcacgatgaaggccacgagattgtc
gcgatggctgacagcgcaggtcacgtggacctgcgcaagttgctcactgaactggggact
cgcggcgtcaacgaagtactggtcgaagccggtccgcggctggcgggtgcgttcacgcgt
cttgggctggtggacgaattccagattttcatcgccggcaagtttctcggttcctcggcc
cgaccattgctcgacctgccgctggcgcagatgagcgaagcgctggaactgaagatcgta
gaaatgcgcgccgtcggcaatgactggcgagtcattgctctccctgttcccgtacccggc
gtataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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