KEGG   Pseudomonas viridiflava: CFBP1590__4837
Entry
CFBP1590__4837    CDS       T06554                                 
Symbol
betA
Name
(GenBank) Oxygen-dependent choline dehydrogenase
  KO
K00108  choline dehydrogenase [EC:1.1.99.1]
Organism
pvd  Pseudomonas viridiflava
Pathway
pvd00260  Glycine, serine and threonine metabolism
pvd01100  Metabolic pathways
Module
pvd_M00555  Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:pvd00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CFBP1590__4837 (betA)
Enzymes [BR:pvd01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.99  With unknown physiological acceptors
    1.1.99.1  choline dehydrogenase
     CFBP1590__4837 (betA)
SSDB
Motif
Pfam: GMC_oxred_N GMC_oxred_C DAO FAD_binding_2 Lycopene_cycl NAD_binding_8 Pyr_redox_2 TrkA_N Thi4 ApbA FAD_binding_3 HI0933_like
Other DBs
NCBI-ProteinID: SMS12423
UniProt: A0A1Y6JVS9
Position
I:5395536..5397236
AA seq 566 aa
MSQEFDYIIIGAGSAGNTLAARLTEDEGVTVLLLEAGGPDYRLDFRTQMPAALAFPLQGR
RYNWAYETEPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKEPGLEDWSY
LDCLPYFRKAETRDIGANDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRTDDLNG
YQQEGFGPMDRTVTPKGRRASTARGYLDEAKKRSTLNIVTHALTDRILFEGKRAVGVAYL
VGDSDTRHEARARKEVLLCAGAIASPQILQRSGVGPADLLNTLDIPVVHDLPGVGQNLQD
HLEMYLQYACTQPVSLYPSLMWWNQPAIGAEWMFLGTGIGASNQFEAGGFIRSSEAFEWP
NIQYHFLPVAINYNGTKGVQEHGFQAHVGSMRSPSRGRVHVKSKDPREYPSILFNYMASD
QDWQEFRDGIRLTREIMQQPALDPYRGREISPGIDVQSDEALDQFVREHAETAYHPSCSC
KMGTDEMAVVDGQGRVHGMQSLRVVDASIMPIITTGNLNAPTIMIAEKIADKIRGRQPLP
RSTADYFVAGDKPARGKPLREISHQA
NT seq 1701 nt   +upstreamnt  +downstreamnt
atgtcccaggaattcgattacatcatcattggtgccggttcggccggtaacactctggca
gcccgtctgaccgaagacgaaggcgtcaccgttctgctgctggaagccggcggcccggac
tatcgtctggacttccgtactcagatgcctgccgcactggcgttcccgctgcaaggccgc
cgctacaactgggcctacgagaccgagccagagccgcacatgaacaaccgccgtatggaa
tgcggtcgcggcaagggccttggcggctcgtcgttgatcaacggcatgtgctacatccgt
ggcaacgcgatggactatgacggctgggcgaaagaaccgggtctggaagactggagctac
ctcgattgcctgccgtatttccgcaaggcagagactcgcgacatcggcgccaacgattat
cacggcggcgaaggtccggtcagcgtgaccacgcccaaggcaggcaacaacccgttgttc
catgccatggtcgaggccggtgtgcaggctggttatccgcgcaccgatgacctgaatggt
tatcagcaggaaggcttcggtccgatggaccgcaccgtgacgcccaaaggccgtcgcgcc
agcactgcacgcggctatctggacgaagcgaaaaagcgctcgacgctgaacatcgtcact
cacgcgctgactgaccgcatcctgttcgaaggcaagcgtgccgtcggcgtcgcgtacctg
gtcggcgacagcgacacccgccacgaagcccgtgcacgcaaggaagtcctgctgtgtgcc
ggtgcgattgcctcgccgcagatcctgcaacgctcaggcgtcggccctgccgacctgctg
aacacgctggacattccagtggttcacgacctgccgggcgtcggccagaaccttcaggac
cacctggagatgtacctgcagtacgcctgcactcagcctgtgtcgctctacccttcgctg
atgtggtggaaccagcctgcaattggtgcggagtggatgttcctcggcaccggtatcggc
gccagcaaccagttcgaagccggtggtttcatccggtcgagcgaagcgttcgagtggccg
aacattcagtaccacttcctgccggtagccattaactacaacggtacgaagggtgtgcag
gagcatggtttccaggcacacgtcggttcgatgcgttcgccaagccgtggccgtgtgcac
gtcaagtccaaggacccgcgcgagtacccgagcatcctgttcaattacatggcgtccgat
caggactggcaggaatttcgcgacggcatccgcctgacccgcgaaatcatgcagcagcct
gcgctggatccgtaccgtggccgcgaaatcagcccgggtattgatgtgcagtcggacgag
gcgctggaccagttcgtgcgcgaacacgccgagacggcctatcacccgtcgtgctcttgc
aagatgggcaccgacgaaatggccgtggtcgatggccagggccgtgtgcatggcatgcag
agcctgcgtgtggtagatgcctcgatcatgccgatcatcaccaccggcaacctgaacgca
cccacgatcatgatcgccgagaaaatcgccgacaagatccgcggccgccagcccctgccg
cgcagcactgcagactacttcgtggcgggcgacaagcccgcacgtggcaagccgctgcgc
gaaatcagccatcaggcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (27)   

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