KEGG   Pseudomonas viridiflava: CFBP1590__5288
Entry
CFBP1590__5288    CDS       T06554                                 
Name
(GenBank) hypothetical protein
  KO
K11895  type VI secretion system protein ImpH
Organism
pvd  Pseudomonas viridiflava
Pathway
pvd02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:pvd00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    CFBP1590__5288
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pvd02044]
    CFBP1590__5288
Secretion system [BR:pvd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CFBP1590__5288
SSDB
Motif
Pfam: T6SS_TssG HalOD2
Other DBs
NCBI-ProteinID: SMS12874
UniProt: A0A1Y6JSR8
Position
I:complement(5890428..5891435)
AA seq 335 aa
MDTTYGPPAPALSGLTLGIREYSLFQAVLLVVDRLRDAHPHLSEDDLYDQLEFQANPSLG
FPSSDVSRVEFFHEHGHLRARMQFNLIGLVGSGSPLPAFYGEQALGDSEDGNPTRNFLDL
FHHRLQRLMLPIWKKYRYRASFESGALDPFSAQLFALIGLGGEEIRRAQELNWKRLLPYL
GLLSLRAHSAALIEAVLRYYFKHAELTIEQCIERRVEILDEQRNRLGRANSMLGEDLVLG
DHVRDRSGKFRIHIRELDWQRFHEFLPIGFGYQPLCALVRFTLRDPLDYDIRLVLRQEEI
RELRIGEQNACRLGWTSWLGREKADGVVTLGSKIH
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggacaccacgtatgggcctccagcccctgctttaagcgggctgaccctgggtatacgc
gagtactcgctgtttcaggccgtgctgctggttgtcgaccggctgcgcgatgcacacccg
cacctgagcgaagacgacctatacgaccagttggagtttcaggccaacccgagccttggc
ttcccgtcgagtgacgtcagtcgcgtggagtttttccacgagcacgggcatttgcgcgcg
cgtatgcagttcaacctgatcggtctggtcggttcgggttcgccactgccggcgttctac
ggtgagcaggcgctgggcgacagcgaagacggcaacccgacgcgtaacttcctcgacctg
ttccaccatcgcctgcaacggttgatgttgccgatctggaagaaatatcgctaccgcgcc
agttttgaaagcggcgcgctcgatccattttcggcacagctatttgccttgatcggcctg
ggcggcgaagaaatccggcgcgcccaggagttgaactggaaacgcctgttgccctatctg
ggcctgctcagcctgcgtgcgcactcggctgcgctgatcgaagcggtgctgcgttattac
ttcaagcacgccgaactgaccatcgagcaatgcatcgagcgccgggtggaaattctagac
gaacagcgcaaccgcctgggacgtgccaacagcatgctcggtgaggatctggtgctgggc
gatcacgtgcgcgaccgcagcggcaagtttcgcattcatatccgcgagctggactggcaa
cgctttcacgaattcctgccgatcggtttcggctatcaaccgctgtgcgcgctggtgcgg
ttcacgttgcgtgacccgctcgactacgacattcgactggttctgcgccaggaagaaatc
cgcgagttgcgtatcggtgaacagaacgcctgtcgcctgggatggaccagttggctcggc
cgcgagaaagcggacggcgtggtgaccctgggcagcaaaattcattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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