KEGG   Pandoraea vervacti: UC34_09845
Entry
UC34_09845        CDS       T03688                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
pve  Pandoraea vervacti
Pathway
pve02024  Quorum sensing
pve03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pve00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    UC34_09845
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    UC34_09845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pve03019]
    UC34_09845
   03036 Chromosome and associated proteins [BR:pve03036]
    UC34_09845
Messenger RNA biogenesis [BR:pve03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     UC34_09845
Chromosome and associated proteins [BR:pve03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    UC34_09845
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: AJP57223
UniProt: A0A0C5JQ89
Position
2168151..2168387
AA seq 78 aa
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESFDQYVVLLRNTVTQMVYKHAI
STVVPARPVNFHPEAEQS
NT seq 237 nt   +upstreamnt  +downstreamnt
atgagcaacaaagggcaacttctacaagacccgtttctgaacgccttgcgtaaggagcat
gttcccgtctcgatctatctggtcaacggtatcaagctgcagggaaacatcgagtcgttc
gaccagtatgtcgtcctgctgcgcaacacggtcacgcaaatggtttacaagcatgccatt
tcgacggtcgttcctgcgcgtccggtgaatttccatccggaagccgagcagtcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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