KEGG   Chlorobium phaeovibrioides: Cvib_0273
Entry
Cvib_0273         CDS       T00499                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
pvi  Chlorobium phaeovibrioides
Pathway
pvi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Cvib_0273
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvi03021]
    Cvib_0273
   03400 DNA repair and recombination proteins [BR:pvi03400]
    Cvib_0273
Enzymes [BR:pvi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Cvib_0273
Transcription machinery [BR:pvi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Cvib_0273
DNA repair and recombination proteins [BR:pvi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Cvib_0273
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L CxC3 CbeA_antitoxin
Other DBs
NCBI-ProteinID: ABP36295
UniProt: A4SCT6
Position
273370..274356
AA seq 328 aa
MIYQMQMPAKIEVDETTHTDYFGRFVAQPLERGYGVTLGNMMRRVLLASLPGTAITGIKV
DGVFHEFSAIEGVREDVPEIVLNLKKVRFRSTCKRSCKTTLTITGPKDFTAGDIVAMEGE
FDVLNKDLHIATVNEGSTLNIDVFVGRGRGYTPAEDNRPESMPIGYIAIDAIYTPIRNVK
VAVENTRVGQRTDYEKMVLDVETDGSITPDDSISLAGRIINEHVAFFADFSPTEEEFTEE
EFKQQDDEFEAMRKLLNTKIEDLDLSVRSHNCLRLAEIDSIGDLVSRKEDELLNYKNFGK
KSLTELKEQLEKFELKFGMDITKYQMKG
NT seq 987 nt   +upstreamnt  +downstreamnt
atgatataccagatgcagatgcctgcgaaaatagaggtcgatgagacgacgcacacggat
tattttggccgttttgtcgcacagccgctggagcggggttatggtgtgactcttggcaat
atgatgcgccgcgttctgcttgcttcccttcccggaactgcaattacgggtattaaggtt
gatggcgtctttcatgagttttcggcaattgaaggagttcgcgaggatgtccccgagatt
gtgctgaacctgaaaaaggtccgtttccgttctacctgcaagcgcagctgcaagacgacg
ctgacgattaccgggccgaaggattttaccgctggtgatattgttgctatggagggagag
tttgatgtattgaacaaggatctccacattgcaaccgtcaatgagggttcaacgctcaat
attgatgtgtttgtaggacgcggtcgcggatacacacctgctgaggataaccgtccggaa
agcatgcctatcgggtatatagccattgatgccatctacactcccatcaggaatgtcaaa
gtcgcagttgagaatacccgtgtgggacagcgcactgactatgaaaaaatggtgttggat
gttgaaacagacggctctattacgcctgatgattccataagccttgctggtcgcatcatc
aacgagcatgtggccttctttgctgatttctctccgactgaagaggagttcacagaagag
gagttcaagcagcaggatgatgagttcgaggcaatgcgcaaacttctgaatacaaaaatc
gaggatctcgatctttcagtccgttcgcacaactgccttcgtctcgcggagattgattcc
attggcgacctggtctcacgcaaggaagacgaactgctcaattataagaatttcggtaag
aagtcgctcacggagctgaaagagcagcttgaaaaatttgagctcaagtttggtatggat
atcaccaaataccagatgaaaggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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