KEGG   Proteus mirabilis CYPV1: AOB99_01555
Entry
AOB99_01555       CDS       T04093                                 
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
pvl  Proteus mirabilis CYPV1
Pathway
pvl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pvl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AOB99_01555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvl03019]
    AOB99_01555
   03016 Transfer RNA biogenesis [BR:pvl03016]
    AOB99_01555
Enzymes [BR:pvl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     AOB99_01555
Messenger RNA biogenesis [BR:pvl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     AOB99_01555
Transfer RNA biogenesis [BR:pvl03016]
 Prokaryotic type
  tRNA degradation factors
   AOB99_01555
SSDB
Motif
Pfam: RNase_PH PNPase S1 RNase_PH_C KH_1 S1_2 KH_2 SLS1_KH2 UPF0181 aRib
Other DBs
NCBI-ProteinID: ALE24163
UniProt: A0A1Z1SNU1
Position
303910..306039
AA seq 709 aa
MLNPTVRKFQYGQHTVTLETGMMARQATAAVMVDMDGTAVFVTVVAKKKVKEGQDFFPLT
VNYQERSYAAGRIPGSFFRREGRPGEGETLIARLIDRPLRPLFPEGFLNEIQVVATVVSV
NPQVNPDIVAMIGASAALSLSGVPFNGPIGGARVGFIDGQYVLNPTVDELKISKLDLVVA
GTAGAVLMVESEADLLSEEQMLGAVVFGHEQQQVVIENINALVAEVGKEKWDWAPEPINQ
SLHDRIAQLAQTRIGDAYRITEKQERYEQIDAIRDEVISTLLAEDESLDEGEIIEIFSGL
EKKIVRARVLAGEPRIDGREKDMVRALDIRTGLLPRTHGSALFTRGETQALVTATLGTAR
DAQTIDDIMGEHTDTFLLHYNFPPYSVGETGMMGSPKRREIGHGRLAKRGVLAVMPTIEE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKESVAGIAMGLVKEGENFVVLSD
ILGDEDHLGDMDFKVAGSRNGVSALQMDIKIEGITREIMQVALNQAKSARLHILGVMESA
ISQPRAEISEFAPRIHTIKINADKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
SGEQAKQAIARIEEITAEVEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVSDYLTMGQEVPVKVLEIDRQGRIRLSMKEAQATQQEAAETSSEDPAN
NT seq 2130 nt   +upstreamnt  +downstreamnt
ttgctgaatcctacagttcgtaaatttcaatacggtcaacataccgttacgttagaaacg
ggcatgatggctcgccaagcaacggctgctgtaatggttgacatggacggcactgctgtt
tttgttaccgttgttgctaagaaaaaagtgaaagaaggacaagacttcttcccactcacc
gttaactatcaagagcgttcatacgcagctggccgtattccaggaagtttcttccgtcgt
gaaggtcgtcctggcgaaggtgaaactttaatcgcgcgtcttatcgaccgccctttacgc
ccactattcccagaagggttcttaaacgaaatccaagtagttgcgactgtggtttctgtt
aatccacaagttaacccagatatcgttgctatgattggtgcttctgcagcactgtcatta
tcaggtgtacctttcaatggtcctatcggtggtgctcgtgttggctttattgatggtcaa
tatgtgctgaacccaaccgttgatgaactgaaaatcagtaaattagacttagtggttgca
ggtactgcgggtgcggtactgatggttgaatcagaagctgatttattatcagaagaacaa
atgttaggtgcagtggtatttggtcatgaacaacaacaagttgtgattgaaaatatcaat
gcattagttgctgaagtcggtaaagaaaaatgggattgggcaccagagcctattaaccaa
tctttacatgatcgtattgctcaattagcacaaactcgtattggtgatgcatatcgtatt
actgaaaaacaagaacgttatgagcaaatcgatgctattcgtgatgaagtgatcagcaca
ttattagcagaagatgagtctttagacgaaggcgaaatcattgaaattttctctggttta
gagaagaaaattgttcgtgctcgtgtattagcaggtgaacctcgtatcgatggtcgtgaa
aaagacatggtacgtgctttagatattcgtacaggtttattaccacgtacacatggctct
gcgctatttactcgtggcgaaactcaagcattagtaacagctactttaggtactgcacgt
gatgcacaaaccattgatgacatcatgggtgagcataccgataccttcttactgcactac
aacttccctccatattctgtcggtgaaacaggtatgatgggttcgccaaaacgtcgtgag
attggtcatggtcgtttagcaaaacgtggtgtattagccgttatgccaacgattgaagaa
ttcccatacacagtacgtgtagtgtctgaaattacagaatccaatggttcatcttcaatg
gcatctgtttgtggtgcttctttagcactgatggatgcgggtgtaccaattaaagaatct
gttgctggtattgcaatgggtctggtaaaagaaggtgaaaacttcgttgttctttctgat
attttaggtgatgaagaccatttaggtgatatggactttaaagttgcgggtagccgtaac
ggagtcagtgcattacaaatggatatcaaaatcgaaggtatcactcgtgaaattatgcaa
gttgcgttaaatcaagcgaaaagcgcacgtctgcatattttaggggtaatggaaagtgca
attagccagcctcgtgcagaaatttctgagtttgcaccacgtattcacactatcaaaatc
aatgctgataagatcaaagatgttatcggtaagggtggttcggttatccgtgcattaacg
gaagaaacggggaccactatcgaaatcgaagatgatggtacagtgaaaattgcggctact
agtggcgaacaagcaaaacaagctatcgctcgtatcgaagagatcacggcagaagtcgaa
gttggccgtatctataacggtaaagtaacacgtatcgttgatttcggtgcatttgttgct
atcggcggtggtaaagaaggtctggtgcatatttctcaaatcgcagacaaacgcgttgag
aaagtaagtgattacctgactatgggtcaagaagttccagtgaaagtactggaaattgac
cgccaaggccgtatccgcttaagcatgaaagaggctcaagcaacccagcaggaagcagct
gaaacttcttctgaagatcctgcaaattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (21)   

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