KEGG   Penaeus vannamei (Pacific white shrimp): 113800384
Entry
113800384         CDS       T06111                                 
Name
(RefSeq) transcription initiation factor IIB-like isoform X1
  KO
K03124  transcription initiation factor TFIIB
Organism
pvm  Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pvm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    113800384
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvm03021]
    113800384
Transcription machinery [BR:pvm03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     113800384
 Prokaryotic type
  Archaeal type
    TFB
     113800384
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Cyclin_N Cyclin_C Sigma70_r4 RB_B HcyBio
Other DBs
NCBI-GeneID: 113800384
NCBI-ProteinID: XP_027206952
Position
Unknown
AA seq 313 aa
MASGGRFNEVCCPQHPEAHLIEDYRAGDQICSECGLVVGDRVIDVGSEWRTFSNEKANSD
PSRVGGAENPLLNGSDLSTIIGPGTGSASFDGFGGSKYQNRRSMSSSDRALINAFREISN
MADKINLPKAITDRANMLFKQVHDGKNLKGRSNDAIASASLYIACRQEGVPRTFKEICAV
SKISKKEIGRCFKLILKALETQVDLITTGDFMSRFCSNLGLPTAVQKGATHIARKAVDLD
IVPGRSPISVAAAAIYMASQASEDKRTQKEIGDIAGVADVTIRQSYKLMYPRAKELFPED
FKFYTPVDQLPQL
NT seq 942 nt   +upstreamnt  +downstreamnt
atggcgagcgggggccgttttaatgaggtctgctgtcctcagcatccagaagcacattta
atagaggattaccgtgctggtgaccagatctgctcagaatgtggcctggttgttggtgac
agagtgattgacgtgggttcagagtggcgtacattcagcaatgaaaaggccaacagtgac
ccttcccgtgtgggaggtgcggaaaacccactcctaaatggctctgatctctccaccatt
attggacccggcacaggcagcgcatcattcgatgggttcggagggtccaaatatcagaac
agaagatctatgtcaagttcagaccgtgccctcattaatgccttccgagagatcagtaac
atggcagacaagatcaacctgccaaaagccattactgacagagcaaatatgttgttcaaa
caggtgcatgatggcaaaaatttgaaaggccgtagcaatgatgccatcgcgtcggcttcc
ttatacatagcctgtcgacaggagggagtacccagaaccttcaaagaaatttgtgctgtg
agcaagatcagtaagaaagaaattggacgatgcttcaaacttatcttgaaggctctggaa
acccaagttgatctcatcaccaccggagacttcatgtcaaggttttgctcgaatcttggc
ctcccgacagctgtccagaagggtgccacccacattgccaggaaagctgttgacttggac
atcgttcctggaaggtcacccatttccgtagcagcagcggcaatttacatggcctcacaa
gcttcagaggacaagcgaactcagaaggaaatcggtgacattgctggtgttgcagatgtc
accatcagacagtcatacaagcttatgtacccaagagcaaaggagcttttcccagaagac
tttaagttctatacacctgtggatcagctgccacagttatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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