KEGG   Penaeus vannamei (Pacific white shrimp): 113808245
Entry
113808245         CDS       T06111                                 
Name
(RefSeq) ATP-dependent RNA helicase Ddx1-like
  KO
K13177  ATP-dependent RNA helicase DDX1 [EC:5.6.2.7]
Organism
pvm  Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:pvm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvm03041]
    113808245
   03016 Transfer RNA biogenesis [BR:pvm03016]
    113808245
Enzymes [BR:pvm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     113808245
Spliceosome [BR:pvm03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    113808245
Transfer RNA biogenesis [BR:pvm03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    113808245
SSDB
Motif
Pfam: DEAD Helicase_C SPRY CMS1
Other DBs
NCBI-GeneID: 113808245
NCBI-ProteinID: XP_027215386
Position
Unknown
AA seq 698 aa
MAAFEEMGVMPEIAKAVEEMDWTLPTDVQNEAVPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLKDIQQGKTSKVNKEVSPHWLMSFFDRDAGMAVTPDGLRCQSRDPKAWQGVRC
TKGVVGKGKYYYEATVSDEGLCRVGWATPQVRKRERKEEMSWRKHTYAGQTRAGASTLRS
EFKNATFLPAVVLKNAEMSFNFGATEFKYPPKGGFMAICQAPKDCTVTSGVRGGDKPQKV
ENNAPQAIIIEPSRELAEQTLTQLKLFHKHLDNPVVRDLLVVGGIPVKDQIAALNSGIDI
VCGTPGRLEDLINTGQLSLQSCKFFVLDEADGLLKQGHERLVNNIHSAIPKITSDGKRLQ
MIVCSATLHSFEVKRMAERLMHFPTWVDLKGEDAVPETVHHVVVTVDPRADTTWSTLRRH
IPTDGVHQKDNVRPGNNTPETLSEAVKMLKGEYCLKAIDTHKMDKALIFCRTKLDCDNLE
RYFNQIGGGPKNPANPYSCVCLHGDRKPNERKANLETFKNGRVRFLICTDVAARGIDVNG
LPFIINVTLPDEKSNYVHRIGRVGRAERMGLAISIVAAVPEKVWYHGEWCPTRGRNCYNT
RLTTEKGCCTWYNEPQYLADIEEHLGVTIQQVDKEMKVPVDEFDGKVVYGEKRAAAGSNY
QTHVEQLAPAVKELADLERQTQTIYLKRQYGKEYPWTR
NT seq 2097 nt   +upstreamnt  +downstreamnt
atggcagctttcgaagaaatgggcgtaatgccagagattgcaaaagctgttgaggagatg
gattggacactccctacggatgtgcagaatgaagccgtgcccctcatcttaggaggtgga
gatgtactgatggctgcagaaacaggcagtggcaagaccggagctttttgcctgcccatc
ttgcagatcgtgtgggagacgctcaaggacatccagcagggcaagacgtccaaggtcaac
aaagaagtctcaccccactggcttatgagcttctttgaccgtgatgcgggcatggcagtg
acccctgatggtctgcggtgccagtcacgtgaccccaaggcctggcagggtgtccggtgc
actaagggggttgtgggcaagggcaagtactactacgaggccactgtatctgatgaaggg
ctgtgccgtgttggatgggcaacacctcaggtgagaaagagggaaagaaaggaagaaatg
agttggaggaagcatacatatgcaggacagacgagagcaggcgcttcaacccttcgtagc
gagttcaagaatgccaccttcctcccagctgttgtactgaagaatgcagagatgtctttc
aactttggggcaacagaattcaagtaccctccaaaggggggctttatggccatctgtcag
gctcctaaggattgcacagtaacttcaggtgtcaggggcggagacaagccacagaaggtg
gagaataacgctcctcaggccatcattattgagccctctcgagagctagcggagcagacc
ctgacacaactcaaattgttccacaaacacctggacaatcctgtggtacgtgacttgttg
gtggtaggtggcattccagtgaaagaccagattgcagctctcaactcaggcatcgacatt
gtgtgtggcactcccggtcgattggaggacctcatcaacacaggacagctctcactccag
tcgtgcaagtttttcgttcttgatgaagctgatggtctgctgaaacagggacatgaacgc
cttgttaataacatccacagtgccatccctaagatcacatctgatggaaagaggctccag
atgattgtctgttctgcaacactgcattcctttgaggtcaagcgcatggctgaacgcctg
atgcacttcccaacgtgggttgaccttaagggagaagacgctgttcctgagactgtccac
catgttgttgttacggttgacccgcgtgctgacaccacctggagtaccttgcgacgccat
atccctacagatggagtacaccagaaggacaatgtccggccaggaaacaatacgcccgaa
accctgagtgaagctgtgaagatgctgaaaggagagtactgtctcaaagccattgacacc
cacaagatggacaaagcgctgatcttctgccgtacaaagcttgactgtgataacctagag
cgctatttcaatcagattggtggaggacccaagaatcctgccaatccctactcctgtgta
tgcctccatggtgatcgtaaacccaacgaacgtaaagctaatcttgaaaccttcaagaat
gggcgagtcaggttcctcatttgcactgatgttgctgcccgtggaattgatgtcaacggc
ttgcccttcattatcaatgtgactctgccagatgagaagagcaactacgtgcatcgtatt
ggccgtgtgggtcgagcagagaggatgggtctggccatctccattgttgcagctgtgcca
gagaaagtgtggtaccatggtgaatggtgtccaacaagaggacgtaactgttacaacact
cgcttgacgacagaaaaaggctgttgtacatggtataatgaaccccagtacttggctgac
attgaggaacacctgggagtaaccattcagcaggtggacaaggagatgaaggtccctgtg
gatgaatttgacgggaaggttgtctatggtgagaagagggcagctgcaggttcaaactac
cagacccatgtggaacagcttgcacctgctgtcaaggaactagcagaccttgagagacaa
acacagaccatctacctgaaacggcagtatggaaaggagtatccctggactcgataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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