KEGG   Penaeus vannamei (Pacific white shrimp): 113811787
Entry
113811787         CDS       T06111                                 
Name
(RefSeq) LOW QUALITY PROTEIN: endoribonuclease Dicer-like
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
pvm  Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:pvm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pvm03036]
    113811787
Chromosome and associated proteins [BR:pvm03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    113811787
   microRNA pathway
    RISC loading complex
     113811787
SSDB
Motif
Pfam: Ribonuclease_3 Dicer_platform Dicer_dsRBD Ribonucleas_3_3 Dicer_dimer PAZ Helicase_C Dicer_PBD dsrm
Other DBs
NCBI-GeneID: 113811787
NCBI-ProteinID: XP_027219408
Position
Unknown
AA seq 2473 aa
MMNRVQPENVHSTIFTPREYQVELVDACLKGNTLSVLASRSTRTFLITMVTREMAHLTRS
KEQGGKGQRTLLTGWSGPGLVRAGEAIQQNTNLAVTTYTRLEQVEGWLPSRWSQTFTEAQ
VIIMTVDVLEKGLETGLLQLDMLNLLVITDAHRVATFPPLIKVLNLCRGCRILGMTSPVL
SHACSPPQLESFLTHLQDATSCVVDTSSEIVTVLRYVNKPVEKIVMCRDPDPDERSEVEL
EVRRLVGEALSFLDNHRYDLVEVYGPEYQEFCDDLPDPNKEPRQILMDFLDVLNNLGLWC
ADRAALYALVEVEKLKKKTAYDRHYLLLCMIFTVMARIRAVVEQAFDKYSELDQILKFST
PKVLRLVEILRQVRPLNFVDPRKRRDRLEVFENGKAAAALEGSEDTQENKTSSEDKNVEK
DSTKPVTDGGNTENLQGSSSKLKIEMSCESSEEPSDTTLCVQESIYGISEIPLVSSGDGA
KDPNDECEVNSGNAMPDLKAVEELSEGHSQIHGTEPSSEDPFLADENSTEDKSELSHGAP
SNMFCGSSIEDSSEVVDISTDGGYFTAVSDVSPKCTSKAVSDSYTNDIEDCMMKANCNNY
EVNVSRMTEINTENVCAEVTDKYSCLQDSLEDGVDFTKHSMKERTADDMHFTVQTCPETT
QYCSNACEDVVAKTNDEDGSALEDSLCRLNIKESSCTDGCDTESIKSCDLHNGVLSAKND
LLDTAMIQNVKNMTLCNGFEHGNKEDIMDSEKDITSKMNGHVDPSEYDSESEDISDKYKS
CESVQSQASVETSSKEGSISDTYVPPATSDLPCKADATSAVDETATPSDSAPSEQELPTC
TNGVENTEDPALVSTSGTTQNTTICSDSAAFSNANNGIQPTTQAVSSEAAAMADTLAMLL
PNSGKGRKRRDDVKEKVKVHNPEDPDSVCGLIFVHHRSMAKIIYRLLKELSDIGGDFAWI
FPQYTVEAKESVKEDPRAAEAEHKKQEEVLRRFRHHECNILVSTRVLEEGIDVPQCNLVL
RFDPPTDYRSYVHSCGRARGHDTFYFHLITKNQEISFLHDMATYSAFQQVLVSHCGSVEV
GTDREVLSSEANAAHAPYITPAEAAVTMASAIGLLNKYCAKLPSDTFTRLTAMWDVEEIK
EAEALTPVYKCKIMLPINSPLKGTIEGPWQKKVSLAKMAAALECCRRLHQMGELDDQLQP
VGKESMKLDDHLCAPPADDQVPEGMPRPGTTKRRQYYYKKVAVCLTGEQPKQGLDLFVYK
LDMVLTCPIPDEQNTRGRKIYRPEQSSRSFGIITTKPISQVSGFPVFTRSGEVVVHVQEI
ERKVNVTQDQLSALQYFHKFTFTHVLRLEKYPIKFDPTNARTAFYIVPLNKFNGSEGIDW
EFVKEIQSEGDPRPVPPQDDARKKFQFQHDLYEDAVVMPWYRNQDQPQYFYVAEICTHLN
PQSDFPDAGFETFEKYYLTKYGLQICNLAQPLLDVDHTSGRLNLLTPRHVNRKGVALPTT
SEETKRAKRENLQQKQILVPELCTIHPFPASLWRKAVCLPTILYRINALLLADQLRLSVA
SEVGLGLQTLLPDFSWPPLDFGWSLADVLRKNQENQEQDDKSNIATEATNSKQKASKAEN
PECESPTLAAKKKAPKKGNDMEIGTWSNDMAVDPPTPPFDMDTMNGPDEFEIDTFDPNVA
LPDNLTLLNGFSGADDDIEGELGADWGTGITERRTKSSCNKDSKGGMFRVGSPSNFESDG
WDMFGSSGYNGGYGGYGSYDAYGGYGDFQGLADDLEGCESDVSSDMDDDDKSQTEKLWDE
EGTKRRSSMAADEGSSDEEIDLNWPDEDEEVRNEKEKEFQSFLEDKQKIIKESSCYLAES
ESLLIEKAHRKLQNESKSSPEKVSHRTESSTTEGCEQLSSKGCDNAQQSTSIIIRTVNRD
ETLALKRPDSEVQCSSWNSICEEMSFSFDFQPDLLNHPGPSPSVILQALTMSNANDGVNL
ERLETIGDSFLKYAITTFLLYXYPQRHEGKLSYLRSKQVSNLNLYRLGKRKGLGECMVAT
KFEPHDNWLPPGYFVPRELEEALIDSGVPAGHWNMADLPGLHDLASDEIRRLVQERSEQI
KRSKSEQATSELMATQNPHDLPIFIPYNLLTQHSIPDKSIADCVEALIGAYLTTCGPRGA
LLFMSWLGIKVLPCTLESSPEACELITYGHLESPQSPLYHCPLTDTRKELDLLLSGYQVF
EEKIGYTFRDRSYLLQAFTHASYYKNRLTDCYQRLEFLGDAVLDYLITRHLYEDKRQHSP
GALTDLRSALVNNTIFASLAVKYDYHKYFRHFSPGLDRVIRDFVKMQEENGHKINEEYYF
MEEDECEAAEDIEVPKALGDVFESVAGAIFLDSGSSLDAVWSVYYTMMCREIEQFSGVVP
KSPIRELLEMEPETAKFGKPERLVDGKVRVSVEIFGKGSFSGVGRNYRIAKSTAAKRALR
HLKKLQMMANQGI
NT seq 7422 nt   +upstreamnt  +downstreamnt
atgatgaaccgggtacaaccagaaaatgttcactccaccatatttactccacgagaatat
caggtggagttggtggatgcctgcctcaaagggaacaccctttcagtgctggcctcccgc
tccacaaggacattcctcatcaccatggtcacacgagaaatggcccatctcactcggagc
aaggagcagggaggcaagggacagcgaacattactcactggttggtcagggccagggctg
gtgcgtgcaggcgaggctattcaacaaaataccaacttagctgtgaccacttacacaagg
cttgagcaggtggaaggctggctaccttcacgatggagtcagacttttacagaggcccag
gtaataattatgactgtggatgtacttgaaaaagggcttgaaactggattattacagcta
gacatgttgaacttacttgtaattactgatgcacaccgtgtagcaactttccctccttta
attaaggttttaaatttatgtcgtggatgtaggatccttggcatgacatcaccagtccta
agtcatgcctgttcaccaccacaattagaatccttccttacacaccttcaggatgctaca
tcttgcgtggtagacacttcctcagaaattgtcactgtcctgaggtatgtgaataagcca
gttgagaagattgtgatgtgccgtgacccagaccctgacgaacgttcagaagtagaacta
gaagtgcgtaggcttgtgggagaagctcttagtttccttgataatcatcgctatgatttg
gtggaagtctatggtccagagtaccaagaattttgtgatgatctgcctgaccccaacaaa
gagccaaggcagatattgatggatttccttgatgtgctcaataatttaggattgtggtgt
gctgaccgtgcagcattgtacgcgctagtggaagttgagaagcttaagaaaaaaacagct
tatgacaggcattatcttctgttgtgcatgatcttcactgtcatggcacgtataagagct
gttgttgaacaagcatttgataaatattctgaattagatcagattttgaaattctcaact
ccaaaggtattgcgcctggtagagatcttacggcaggtccgacctctcaactttgtagat
ccacgtaagagaagagatagattagaagtgtttgagaatgggaaagcagctgctgctctt
gaaggtagtgaagacacacaagaaaacaaaacttcatcagaagataagaatgtagagaaa
gattctacaaaacctgtaactgatggaggaaacacagaaaatctacaaggatcttcctcc
aaattgaaaatcgaaatgagctgtgaaagttcagaagagccaagtgatacaacattatgt
gttcaagaaagcatttatggaatttcagaaattcctcttgtaagctcaggagatggtgct
aaagatccaaatgatgaatgtgaagtaaacagtggaaatgccatgccagacctcaaagct
gtggaagagctgagtgaaggccattctcagatccatggcacagagccatcatcagaagat
cccttcttagctgatgaaaattccacagaagataaatcagaattgtctcatggagctcca
tcgaacatgttttgtggatcatccattgaagattctagtgaagttgttgacatatccact
gatggaggatattttactgctgtctctgatgtttctccaaaatgtacaagtaaggctgtg
tctgattcgtatacaaatgatatagaagattgtatgatgaaagcaaattgtaataactat
gaagtgaatgtttcaagaatgactgaaataaatactgaaaacgtctgtgctgaagtaact
gacaaatatagttgtttacaagatagcttggaagatggagtagacttcactaagcacagt
atgaaagaaagaactgctgatgatatgcactttacagtacaaacttgccctgaaactaca
caatattgttcaaatgcctgtgaagatgtagttgctaagactaatgatgaggatgggtca
gcattagaggacagtttatgtaggcttaatattaaggaatcatcttgcacagatggctgt
gatacagaaagcattaagagctgtgatctacataatggagttctgagtgccaaaaatgat
ttgctagacactgccatgatacaaaatgtgaaaaatatgactctatgcaatggatttgag
catggcaataaagaagatataatggattctgaaaaagacattacaagtaaaatgaatggc
catgttgatccaagtgaatatgattcagaaagtgaagacattagtgataaatataaaagc
tgtgaatcagtacaaagccaggctagtgtggaaacttccagtaaagaaggctccatatca
gacacatatgttccccctgctacctctgatctgccttgcaaggcagatgctacttctgct
gtagatgaaactgcaactccatctgattctgcaccaagtgaacaggagttacctacttgt
accaatggtgtggaaaacactgaagatcctgctttagtttctacttcagggacaacacag
aacacaaccatttgttctgactctgctgccttttccaatgctaataatggtattcaaccc
acaacacaagcagtatcatcagaggcagctgccatggctgatactttggccatgctatta
ccaaatagtggtaaaggacggaaaagacgagatgatgttaaagaaaaagtaaaggtccac
aatccagaagatcctgattctgtttgtggcctcattttcgtacatcatcgaagtatggcc
aagattatatacaggctgttaaaggaactgagcgacattggtggagattttgcttggatt
ttcccccaatacacagtagaagccaaggaaagtgtaaaggaagatcccagggctgcagag
gcagaacacaagaaacaagaggaagtactcaggagattccgacatcacgagtgcaatatt
cttgtctcaacacgtgtgttagaagaaggaattgatgttccacagtgtaatctggtacta
aggtttgatcctcccaccgattaccgctcatatgtccatagctgtggtcgagctagaggc
catgacactttctattttcacttgattacaaagaaccaggagatcagctttctacatgac
atggctacctattctgcttttcaacaggtgcttgttagtcattgtggcagtgttgaagtg
ggcactgacagagaggttctgtcatcagaagccaatgcagctcatgccccttatataact
ccagctgaagctgctgttacaatggcttcagctatagggctcttgaacaaatactgtgca
aagttaccaagtgacactttcactcgtctaactgctatgtgggatgtagaagaaataaaa
gaggcagaagcgttaacaccagtatacaagtgtaagatcatgttgccaatcaactcgcca
ttgaaagggaccattgagggtccatggcaaaagaaagtttcacttgctaaaatggcagca
gctttagagtgttgtcgaagactgcatcagatgggagaattggatgatcagcttcagcca
gtaggaaaggaaagcatgaagttagatgatcacttgtgtgctccacctgctgatgaccag
gtgccagaggggatgcctcggccaggaacaacaaagaggagacagtattattataaaaag
gttgctgtttgtctgactggggaacaacccaaacaaggactagatttgtttgtctataag
ctagatatggtgctaacttgccccatcccagatgaacaaaacacccgtggtcgtaagatt
taccgtccggagcagtcctcacgttcatttggaattatcacaacaaagccaatctcacag
gtcagtggatttccagtattcactcgttcaggggaagtcgtcgtccatgtccaagaaatt
gaaagaaaggttaatgtcactcaagatcagttgtcagccttacaatacttccataaattc
accttcacacatgtcctacggctggaaaaatatccaatcaagtttgatcctacgaatgca
agaacagctttttatattgtacctctcaacaagtttaatggaagcgaaggcattgattgg
gagtttgtaaaggagatccaatcagaaggagatcccagaccagtccctccacaggatgat
gcaaggaaaaagtttcagttccagcatgacctgtatgaggatgcagtggttatgccttgg
tacagaaatcaagatcagcctcagtatttttacgtagctgaaatatgcactcatctcaat
ccacaaagtgattttccggatgcagggttcgagacctttgaaaaatactacctaactaaa
tatggccttcaaatatgtaaccttgctcagcctttgcttgatgttgaccacacatctgga
agactgaatttgctcacgccacgtcatgttaacaggaaaggagtggcactgcctaccacc
tcagaagaaactaagcgtgccaaacgagagaaccttcaacagaagcagatcttagtacct
gaattgtgcaccattcatcccttcccagcctccttgtggcgaaaagcagtatgtttgcca
accatactctatcgtattaatgctttacttcttgctgatcaactaaggctctcagtggca
agtgaagttggattaggactccagactcttctaccagatttttcatggccacctttggac
tttggttggagtttagctgatgttctcaggaaaaaccaggaaaaccaagagcaagatgac
aaatcaaacattgctacagaagccaccaatagcaagcagaaagcttccaaagctgagaac
ccagaatgtgaatctccaactcttgcagcaaaaaagaaggctcccaagaagggaaatgac
atggaaattggcacatggtcaaatgatatggcagttgatcctcccacacctccatttgat
atggacacaatgaatgggccagatgaatttgagattgatacatttgatcccaatgttgcc
ctgcctgacaacctgactttactgaatggattttcaggtgctgatgatgatatagagggt
gaattgggggctgactggggcactggaattactgaacgacggaccaagagcagctgcaac
aaagacagcaaaggagggatgttcagagtgggttcaccatccaattttgagagtgatggg
tgggacatgtttggtagttcaggttataatggtgggtatggaggatatggttcctatgat
gcttatggtggttatggagatttccagggtctggcagatgatcttgaaggctgtgagtct
gatgtttcatctgacatggatgatgatgataaaagtcagacagaaaaattgtgggatgag
gaggggaccaagaggcggtctagtatggcagctgatgaagggtcatcagatgaagagatt
gacttgaattggccagatgaagatgaagaggtgcgaaatgaaaaggaaaaagaatttcag
tcatttttagaggataaacagaagattataaaggaaagttcctgctatctggcagaaagt
gaatcactactaattgaaaaggctcacaggaaactacagaatgaaagcaaatcatcccca
gagaaggtctctcatcgtactgaaagttctactactgaaggctgtgaacaattatcttca
aaaggctgtgataatgctcaacaatctacctcaatcatcattagaactgtgaacagagat
gaaactcttgcacttaaaaggccagactctgaggtacagtgttcttcatggaacagcatt
tgtgaggaaatgtcattcagttttgatttccaacctgatcttcttaaccatcctggacca
tcaccaagtgtcatactccaggcactcacaatgtctaatgctaatgatggagtcaattta
gagaggcttgaaaccataggggattcttttctgaaatatgccatcacaacttttctcttg
tacnnttatccacaacgtcatgaagggaagcttagttacctacgttcaaagcaagtcagt
aaccttaatctttatcggttaggcaaacggaaagggcttggagagtgtatggtagcaaca
aaatttgagccccatgataactggctgccaccaggatactttgttccaagagaattagag
gaagctttgattgactctggggtacctgcaggtcattggaatatggcagacttacctgga
cttcatgacttggcaagtgatgaaattagacggctagttcaggagcgttcagagcagatc
aagcgcagtaagagtgagcaggcaactagtgaactcatggctacacaaaatccacatgat
ctgccaatatttatcccatacaatttgctcacacagcacagcatcccagacaagagtatt
gctgattgcgtagaagccttgattggtgcttacttgaccacatgtgggcctcggggtgct
ttactgtttatgtcttggcttggaatcaaagttctgccatgtacactagaaagttctcca
gaagcttgtgagcttattacatatggacacttagaatctcctcagtctccactatatcat
tgccctcttactgacactagaaaggaactagatttgcttcttagtggataccaagtgttt
gaagagaagattgggtacacattccgtgatcgttcatacttgttgcaagccttcacacat
gcctcgtactacaaaaatcggttgactgactgctatcagagacttgaattcctaggagat
gctgttcttgattacctgataactcgtcatttgtatgaggacaagaggcagcattcacca
ggtgcactaactgaccttcggtcagcattagtcaataatacaatatttgcatccctggct
gtcaaatatgactaccataaatacttccgccatttctcacctggtttagatcgagtcata
agggactttgtaaagatgcaagaggaaaatggccataaaatcaatgaggagtactacttc
atggaagaagatgaatgtgaggcagcagaagacattgaagttcctaaagctcttggtgat
gtatttgagagtgtagcaggtgcaatctttcttgactctggtagctccttggatgcagtg
tggtctgtgtactatactatgatgtgtcgggagatagaacagttcagtggagtggtacca
aagtcacccattagggagttgttagaaatggaacctgaaacggccaaattcggaaagcct
gaacgtcttgtagatgggaaggttagagtgtcagttgaaatatttggaaaaggatcattt
tcaggtgttgggaggaattatcgtattgcaaaatcaacagctgcaaagagggctctgaga
cacttgaaaaagttacaaatgatggctaatcagggtatctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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