KEGG   Penaeus vannamei (Pacific white shrimp): 113817648
Entry
113817648         CDS       T06111                                 
Name
(RefSeq) WD repeat-containing protein 3-like
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
pvm  Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pvm00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    113817648
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pvm03009]
    113817648
Ribosome biogenesis [BR:pvm03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    113817648
SSDB
Motif
Pfam: WD40 Utp12 ANAPC4_WD40 NBCH_WD40 WD40_like Nup160 FlhC
Other DBs
NCBI-GeneID: 113817648
NCBI-ProteinID: XP_027225505
Position
Unknown
AA seq 953 aa
MGLTTQYLRYVPGSAFGLVGTERCVRFVTKYSQTGRYVAAPACEFVLIWDCKRSSKVLTL
SAGIEGQVTSLEVRPPAPGSLDNTHLAVGYSDGSVVLFDIRTGTSLKFAGHRGAVTTLAW
DDQGMRVASGSQDGEIVVWDVVSERGIVRLKGHQGKITRLRFLKDRSIVVSSCRDSFIKF
WDLDTNHCFRTLTGHRAEVWDFVLLKNDTRLISGSSDAELRVWSLRFKDPEEMAVDDRDG
KSLEPPSKMFRIDTEGEIKGQEDDTEEDDASNLEITRLGSILRSRGDRVCGLQTDGHIVA
CYGKSAVVDLFHVLSEEEVSAKVASRLKKARKRAREAGTAMTENEAPQLGDEIGKLPAVK
AQNKLYGVDVSSDRYGSVKVLALHLDNSLAIFGTSVDAKADKNKSDERKDQEVICQLQLP
GHRTEIRAVAFNSISDQIITASGESLKVWHRSEKQAIATIPCDYALSVIVVPGDRHALIG
TRSGRLQLFDLGSAKMLEDIVAHEPAENETDTGVWALALTHDGRGFLSGGSDKMVKFWKF
ELVKDESESQARRLSFIQDKRALKVADQVTSVRCASDGFYIAVATLDNKETLYYSDTLKL
YHELYGKSLPSTCMDFSTDATLIVTGSKDSSLRIYGTDFGDMRKLLKNAHQGGVTDLQFI
SNTHMFFSCGHDGTLKQWDADNFQRIITLQGHVGIIRCLSVCPKGAWVATCGQDRSIRLW
QRTQEPLVLEDEREEERLKDEEESGMLASQRPAIAGEDGAQAVRPSTTTQETERAVDSIR
EALEIYREQVEAGPTATPHQLMTYVYNTADPLRFVLEVLRKIKSSELEEAVIMLPLDNIL
ELMVVIKGLLENNWDIELASRILVLAVRINLPQLLSSPKAAPLVRSLAKLLPKRIKEFKD
MIGFNAAGLRHMKDRIEERSETQMFAEALENVQTSRKKRKKKDRAVKRALLTI
NT seq 2862 nt   +upstreamnt  +downstreamnt
atgggtttgacaacacaatatcttcgttatgttcctgggtctgcatttggtttggttgga
acagaacgctgcgtgcgctttgtcaccaagtacagtcagacaggaagatatgttgctgca
cctgcatgtgaatttgtgctcatttgggattgtaaaagatcatccaaggtcttgacactg
agtgcaggtattgaagggcaagtcacgtcattggaggtacgccccccagcacctggctct
cttgacaacacgcatcttgcagttggatactcagatggatctgttgtcttatttgatatc
aggactggaacatcactcaagtttgctggtcacagaggagcagttacaacacttgcctgg
gatgatcaaggcatgcgagttgcatctggaagccaagatggagagattgttgtctgggat
gttgtatcagagaggggaatcgtacgactgaaagggcaccagggcaagatcactcggtta
cgcttccttaaagaccgcagcatagttgtatcttcatgcagggactccttcatcaagttc
tgggatctagacactaaccattgttttaggacactgactggacaccgtgcagaggtttgg
gattttgtgttactgaaaaatgatacaagattgatatctggaagtagtgatgcagagctc
cgtgtctggtctctgaggtttaaggatcccgaagaaatggcagttgatgaccgcgatggg
aaatctcttgagcctccttcaaaaatgttccgcattgacacagagggggaaattaaggga
caggaggatgacactgaagaagatgatgctagtaatttagagatcacaagactaggaagc
atacttaggtccagaggagaccgtgtatgtggactgcagaccgatggccatattgtggct
tgctatggcaaatctgcagttgtggatctattccatgttctgtcggaagaggaggtcagt
gccaaggtggcaagcaggctcaagaaggctaggaagagagcaagagaagctggaactgcc
atgacagaaaatgaagctccgcaactaggggacgagattgggaagttgccagctgtgaaa
gcgcagaacaaattgtatggtgttgacgtttcctcagatagatatggaagtgtgaaggtt
ctggcccttcacctagataacagtttggcaatatttggtacttcagttgatgctaaggca
gataagaacaagtcagatgaaaggaaggatcaagaagtgatttgtcagctgcagttacca
ggccacagaacagaaatacgcgctgtggccttcaattcaatcagcgaccagattatcaca
gccagcggtgaatctttaaaagtgtggcataggtctgagaagcaggccatagctacaata
ccgtgtgactatgcgctttcggtgatcgttgtccctggtgaccgccatgccctcattgga
acgcgctctggtcggctgcagctgtttgacctgggatcagcgaaaatgcttgaagatatt
gtcgctcatgaaccagcagagaatgaaacagacacaggagtttgggctctggccctcact
catgatgggagaggatttttatctggtggcagtgacaaaatggtcaaattctggaaattt
gaattagttaaggatgaaagtgaatctcaagcaaggagactgagcttcattcaagacaaa
cgggctctcaaagttgcagatcaagttacttcagtgcggtgtgccagtgatggtttttac
atagcagttgcaacacttgacaacaaagaaacactttattatagtgatactttgaagttg
taccatgaactgtatggcaagtccctcccttcaacttgcatggacttttccacagatgca
acattgatagttacaggcagtaaagattcaagccttcgcatatatggaacagattttgga
gacatgaggaaactgctgaagaatgcccaccagggaggtgtgacagacctccagttcata
tcgaatacacatatgttcttctcatgtggtcatgatggcacactcaagcagtgggatgca
gataattttcagaggatcatcacgctgcaaggacacgttggcatcattcggtgcctgtca
gtgtgccctaagggggcctgggtggccacctgtggccaggaccgctctatccgcctatgg
cagcgcacacaggagccattagtacttgaagatgagcgtgaagaagaacgcctgaaggat
gaggaagagagtgggatgttggcatcacagagacctgctattgctggagaagatggagcc
caagcagtccgtccttctaccaccacacaggagactgagagagcagttgattccataaga
gaggcattggagatctatagagagcaggtggaggcaggccccactgccacgcctcaccaa
ctcatgacgtatgtttataatactgctgacccccttcgatttgtcttggaagtccttaga
aagatcaaatcaagtgagctggaagaggctgttatcatgctgccactagacaacatcttg
gagttgatggtggttattaagggccttttggagaacaattgggatattgaattagccagc
aggatactggtgttggctgtgaggatcaacctacctcagctcctctcctccccaaaggca
gctccactggtgaggtctctggctaagcttctacccaagaggatcaaggagtttaaggac
atgattggctttaatgctgctgggttacgtcacatgaaagatcgcattgaggaacgctcc
gagacacaaatgtttgctgaggcattagaaaatgtacagacatccaggaaaaagagaaag
aagaaagatcgtgcagtcaagagggctcttcttactatttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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