KEGG   Penaeus vannamei (Pacific white shrimp): 113817808
Entry
113817808         CDS       T06111                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
pvm  Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03020  RNA polymerase
pvm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pvm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113817808
  09124 Replication and repair
   03420 Nucleotide excision repair
    113817808
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvm03021]
    113817808
   03400 DNA repair and recombination proteins [BR:pvm03400]
    113817808
Transcription machinery [BR:pvm03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     113817808
  RNA polymerase III system
   RNA polymerase III
     113817808
  RNA polymerase I system
   RNA polymerase I
     113817808
DNA repair and recombination proteins [BR:pvm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      113817808
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C
Other DBs
NCBI-GeneID: 113817808
NCBI-ProteinID: XP_027225712
Position
Unknown
AA seq 210 aa
MDDEAETYKLWRIRKTIMQLCHDRGYLVTQDELDQTLDQFKEQFGDKPSERHPARSDLIV
LVAHNDDPTDQMFVFFPDEPKVGVRTIKTYCTRMQEENIQRAIIVVQSGMSPSAKQALVD
MAPKYILEQFLESELLINITEHELVPEHVVMTAEEKTELLQRYKLKDNQLMRIQAGDPVA
RYFGLKRGQVVKIIRPSETAGRYISYRLVV
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgacgaagctgagacttacaagctttggcgtatccgtaagaccatcatgcagctc
tgccacgaccgtgggtacttagtaacacaagatgaattggatcagacacttgatcaattc
aaggagcagtttggagacaaaccatcagagcgtcaccctgcaagatcagacctgattgtg
ctagtagcccacaatgatgatccaacagatcagatgtttgttttcttcccagatgaacca
aaggtgggggtacgaacaatcaagacttattgcaccaggatgcaggaagagaatattcaa
cgtgctatcattgttgtgcagtcaggaatgtctccatctgccaaacaggctttagtcgac
atggcacccaagtacatccttgaacagtttttagaatctgagttgctgatcaacatcaca
gagcacgaacttgtaccagaacatgtggtcatgacagcagaagagaaaacagagttgctt
cagagatataagctgaaggataatcagcttatgagaatccaggctggagatccagtggca
cggtattttggcctgaaacgtgggcaggtagtgaaaattattcgaccatctgaaactgct
ggacggtacatttcatatagactagtggtgtga

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