KEGG   Penaeus vannamei (Pacific white shrimp): 113819291
Entry
113819291         CDS       T06111                                 
Name
(RefSeq) autophagy-related protein 16-like
  KO
K17890  autophagy-related protein 16-1
Organism
pvm  Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04136  Autophagy - other
pvm04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:pvm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    113819291
   04136 Autophagy - other
    113819291
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvm04131]
    113819291
   03029 Mitochondrial biogenesis [BR:pvm03029]
    113819291
Membrane trafficking [BR:pvm04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    113819291
 Others
  Rab GTPases of specific organelles
   Auto phagosome
    113819291
Mitochondrial biogenesis [BR:pvm03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    113819291
SSDB
Motif
Pfam: ATG16 WD40 ANAPC4_WD40 NBCH_WD40 eIF2A Ge1_WD40 Cytochrom_D1 KASH_CCD
Other DBs
NCBI-GeneID: 113819291
NCBI-ProteinID: XP_027227334
Position
Unknown
AA seq 564 aa
MALCWNKASDGHWRHRIYQRLRDRNKKEYENINDLIQLHNRLFEQSELLRTENLQLTLQN
EKLRQENSDLHSKGGGGDGGSGSGSAAAGASSQVVQALEQKLYKLQEELTDLHRRKGENA
QQLVELNQCLQERDKLLATKENKLAEYESEILILKEELAAKESALADLQAVNQVLRDEYQ
TLNLAFTALEDKYRKAQDENRELIDRWMAQKAKDAEKLNMENDTALKKRQMMLEEQLKEA
AREPKQVSLESKFACSPPICLTAVLPAKAYLRYDAHDGEVNSVCFSPQGKIVATGGADRK
LKLWDISRATVEARGVLTGSNAGVTAIDFDAEESLILGASNDFASRVWTVMDHRLRHTLT
GHSGKVMAAKFLSESSKVVTGSHDRTLKIWDLRSRACIRTIFAGSSCNDLVPSDSAATTI
ISGHFDKKIRFWDTRTEQSANEVPLQGKITSLCLSRDGFYLLSCVRDDSLKILDLRKNQV
VNTFTCEGFHVGADYSRAVFSPDATYVAAGSGDGSVYIWNVSTGKLEKTLREHVACVVAC
SWHPNGKSLVSCDRAKKVVAWSDF
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggctctgtgctggaataaagcctccgacggccactggaggcacaggatataccagaga
ctacgcgacaggaataaaaaggagtatgagaacatcaacgacctcatccagctgcataat
cggctcttcgagcaaagtgaattactaagaacagagaacctacagctaacacttcagaat
gagaagcttcgtcaggagaactcagacttacacagtaaaggaggtggaggagatgggggc
agtggatctggttctgctgctgcgggtgcctcctctcaagtggttcaggcactggaacag
aaattgtataagctacaagaagaattaacggacctccacagacggaagggtgaaaatgcc
cagcagctggtggagttaaaccagtgccttcaggaacgtgacaaattactagcaaccaaa
gaaaataaattagctgagtatgaatcggagatcctgattctcaaagaggaattagcagct
aaagagtcagccctcgcagatctccaggcagtcaaccaagtcctgcgagatgaataccag
acgcttaacttagccttcactgccttggaagacaagtatagaaaagctcaggatgaaaac
agagagttaattgatcgctggatggcccagaaggcaaaggatgcagagaagttgaacatg
gagaatgacacagcactgaagaaacgccagatgatgctcgaggaacagctaaaagaggca
gcaagagaaccaaagcaagttagcttagaaagcaagtttgcgtgtagcccgcctatatgt
cttacagccgtcctacctgcaaaggcttaccttagatatgatgctcacgatggggaagtt
aattccgtctgctttagtcctcagggaaaaattgtagctactggaggcgctgatagaaag
ctcaaactctgggacattagccgtgccacggttgaagcgagaggagtcctcactggcagc
aatgctggtgtgacggccatagactttgatgccgaagaatcgcttatattaggtgcctcc
aatgactttgcaagccgagtctggactgtcatggatcacagattaagacacaccctaaca
gggcattcaggcaaagtcatggcagccaaatttttgtctgagtcatccaaggttgtgacg
ggatcccatgaccgcaccctcaagatatgggacctcagaagccgggcatgtatcagaacg
atctttgctgggtcgagttgcaatgaccttgttccttcagacagtgcagcaacgactatt
atttcgggtcactttgacaagaaaatccgtttctgggacactcggacggaacaatcagcc
aatgaggtgcctctgcaggggaagataacatcactttgtctatccagagatgggttttac
ctcctaagttgtgttcgtgatgattccttgaaaatcttggacttgcggaaaaatcaagta
gtcaacacattcacttgtgaaggcttccatgttggtgcagactactcacgtgccgtgttc
tcccctgatgcgacatatgtggcagcaggaagtggcgacggctctgtctacatttggaac
gtcagtacaggcaagcttgagaagacactcagggaacatgtagcatgtgttgtggcgtgc
agttggcacccgaacggcaagtcactagtgtcatgtgaccgggccaagaaagtggtagcg
tggtcagacttttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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