KEGG T06111: 113823459

Penaeus vannamei (Pacific white shrimp): 113823459

Entry

113823459         CDS       T06111

Name

(RefSeq) transcription initiation factor TFIID subunit 2-like isoform X1

K03128

transcription initiation factor TFIID subunit 2

Organism

pvm Penaeus vannamei (Pacific white shrimp)

Pathway

pvm03022

Basal transcription factors

Brite

KEGG Orthology (KO) [BR:pvm00001]
09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    113823459
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pvm01002]
    113823459
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvm03021]
    113823459
   03036 Chromosome and associated proteins [BR:pvm03036]
    113823459
Peptidases and inhibitors [BR:pvm01002]
Metallo peptidases
  Family M1
   113823459
Transcription machinery [BR:pvm03021]
Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     113823459
   Coactivators
    SAGA/TFTC/STAGA complex
     113823459
Chromosome and associated proteins [BR:pvm03036]
Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     113823459

SSDB

Motif

Pfam:

Peptidase_M1 Peptidase_M1_N NRDE-2

Other DBs

NCBI-GeneID:

113823459

NCBI-ProteinID:

XP_027231914

Position

Unknown

AA seq 1213 aa
MKDLSSKNPKVSGETKGQNPHKMKKDKEIIKPYKLSHQILSLTGINFTRQTVIGFTELTL
IPSKDSIRYIWLNCKQCCVYRVTLNDTLEVQFQYSDPLLEVCQQDSKQRNLEYLNKAQLT
GVTAVDPEIGRGELVITVPLEAQHMIQEGKPLRVGVEFSLEKPQSGLHFVVPNTEGTLVE
KGAHMFTYGNENSARLWFPCIDTWSEVCTWRLEFTVDDFMTAVSCGDLLEVVYTQDMRRK
TFHYYLSTPTCAPNIALVVGPFEIYVDPFMNEITHFCLPNLLPLMKATSKYLHEAFEFYE
ELLSTRYPYSCYKQVYVDEAYNSLHSYATMSILDVNLLCSNRIIDQVYETRKTMALCVAQ
QFFGCFLSRYSWADAWLTTGIANYLMSLYVKKHFGFNEYKDWIHSELRDIIDYEERFGGI
VLDPSSSPNEPQNGPNVPLSQSSSANKDTFYFSVKNPHASSPHYIDVYYKKAHLIIRMLE
FRIGQELMMQVFNKHLSLALIAVGNKGHPAGWANMLLSTATFTKAIFTVTGKDITVFCDQ
WVRQGGHAKFNMKFLFNRKRNIVEMTIEQGYIGELGIRRYVGPLVVWIQELDGTFKHTLQ
IEHQVSKKEIVCHSKSRRNKKKKIPLCTGEEVDMDLSHLDADSPVLWLRLDPDMTLMRAV
EVEQPDNQWQYQLRHERDVTAQTEAINALLRLAKQGAVTTEMRNTLNAVLENEQCFYKVR
CRAAHCLTRVANAMVANWNGPPAMMQIFRKMFGSFSCPNIIRQHDFTSLQNYFILKTLPV
AMAGLRNTHKQCPPEVLGFLMDLFKYSDNSKNRYSDNYYRAALVDALAAAVSPALVQHDP
ATITSDTLTEDMKRILSEIVRYLNLEKMLPCYKYTVTVSCLRALRVLQKNGHLPPKSDIF
KAYAAYPQYIDVRLAAIEQIVDFLIRDGTREDMDFLLTLAESDPVPMIRYRTLVLLAKNP
PFIMGQSHKLDTQQLVDRLWNFMNSGQPCDSRVRCAVLDLYYALYGRRRPACIPASEPAL
VLNLRKPPNPPIMSPVIVKEEEEEKIQPIKREAPPDDVFPELKTEIKTEVNEMPVEVIFT
EDSKVRIKQDDVEVFDEEVDCTVTPSMPTSIDGDMSESTTSLPGECHNVAGAPTGFDSDM
FRTGSADSHGKSHKSKKKKKDKKHKKHKKHKHEHKDKDKLDKLDKFIQEENLSSGSSNPP
SPASPNMPSSMTF

NT seq 3642 nt +upstreamnt +downstreamnt
atgaaggatttgtcatcaaaaaaccccaaggtttctggggaaaccaaaggccagaatccc
cacaagatgaagaaagacaaagagatcataaaaccttacaaattgtctcatcagattcta
agtttgacagggataaatttcacaagacagacagtaattggatttactgaactaacctta
ataccatctaaggatagcatccgatacatctggttgaactgcaagcaatgttgtgtgtat
cgtgtgactctgaatgacactctagaagtacagttccaatactctgatccacttcttgaa
gtatgccagcaagattccaaacagaggaatcttgagtacctcaacaaagcccagttaaca
ggggttactgcagtagacccagagatagggcgaggagaacttgttataacagttccctta
gaagctcagcatatgatccaggaagggaaacctttacgtgttggcgttgaattttccctg
gaaaagcctcagtcaggtttacattttgtggtgcctaacacagaaggaacattagttgag
aaaggggcgcacatgttcacatatggcaatgaaaacagtgctcgattatggtttccctgt
attgacacttggagtgaagtatgcacttggagactggagttcacagtggatgattttatg
acagctgtaagctgtggagacctcttagaggttgtctacacacaggatatgagacggaaa
acttttcactattatctctcaaccccaacatgtgccccaaatattgctcttgttgttgga
ccctttgagatatatgtggatcccttcatgaatgagatcacccatttttgtctccctaat
ttgctgcctcttatgaaagcaacaagcaaataccttcatgaagcttttgaattctatgag
gaacttctttcaacaagatatccctactcatgttacaaacaagtttatgttgatgaagca
tataacagtcttcactcttatgcaaccatgagcattcttgatgtgaatttgctttgtagt
aacagaattattgaccaagtgtatgaaaccagaaaaacaatggctctttgtgtggcacag
caattctttggatgttttctctcccgatactcctgggctgatgcctggctaacaacaggc
attgctaactacctgatgagtctctatgttaagaagcattttggcttcaatgaatacaaa
gattggatacacagtgaattgagagatattatagactatgaagaaaggtttggaggaata
gtgttagacccaagttcatctcccaatgagccacagaatggtccaaatgttcctctttct
caaagcagcagcgctaacaaagacaccttttacttctcagtcaaaaaccctcatgcctct
tcccctcattatattgacgtgtattacaagaaagcccatttgattatacggatgctggaa
ttccgtattggtcaggaattaatgatgcaggtattcaacaaacatctgtcccttgcactg
attgctgtaggtaataaaggacaccctgctggttgggcaaacatgctgttgtcaacagca
acatttacaaaggccatcttcacagtgacagggaaagacattacagtgttttgtgaccag
tgggtacgacaaggaggacatgctaagttcaatatgaagtttctcttcaaccggaaaaga
aatattgttgagatgactattgaacaaggttatattggtgaattaggaattcgtcgttat
gttggtcccttggtggtgtggattcaagagttggatggaacatttaagcacactttacaa
attgagcaccaggtatcaaaaaaagaaattgtctgccattcaaaatcccgaagaaacaag
aagaaaaagattcctttgtgcactggagaggaagtggacatggacctgagccatctggat
gctgattcccctgttctctggcttcgcctggatccagacatgacgctaatgcgtgctgtg
gaagtggagcagcctgacaatcagtggcagtaccaattgagacatgagcgggatgtgaca
gctcagactgaggccatcaatgcccttttgcgattagcgaagcaaggagctgtaacaact
gaaatgaggaatactcttaatgccgttttggagaatgaacagtgcttttacaaggtccgt
tgtagagcagcacactgcctgaccagagtagccaatgccatggtagcaaactggaatggt
cctccagcaatgatgcagatcttccgcaagatgtttggatccttttcctgccccaatatc
ataaggcagcatgactttaccagcttacagaactacttcattctcaagacactgccagtt
gccatggcaggtcttcgcaacacccacaagcagtgtcctcctgaagttttggggttcctg
atggacctcttcaagtatagtgataattccaagaaccgctactcagacaattactaccgc
gctgcacttgttgatgccttggcagctgcagtttctccagcacttgtgcagcatgaccca
gcaaccattacttcagacactctgactgaggatatgaagaggatcttaagcgaaattgtt
cgttacttgaacttagaaaaaatgctgccttgttataagtatactgtgacagtgtcctgc
ctccgtgctctgcgggttcttcagaagaatggtcatttaccgccaaaatctgacatcttc
aaggcatatgcagcttacccacagtatatagatgtgcgccttgcagcaattgagcagata
gtagacttcctaatccgcgatgggactcgtgaagatatggactttttgctgacactggct
gagtcagaccctgttccaatgatcagatatcgtacccttgtactgctagctaaaaatcct
ccattcatcatgggtcagagtcacaagttggacacccagcagctggtggatcgtctctgg
aatttcatgaattctggacagccatgtgactcaagagtacgttgtgcagtgctggatctc
tactacgccttgtatggccgtcgtaggccagcttgcattcctgcctcagaacctgcactg
gtgctgaatcttcgcaaaccaccgaatccacccatcatgagtcccgttatagtgaaagaa
gaagaggaagagaagattcagcccataaaacgtgaggcgccaccggatgatgttttcccg
gagctcaagacagaaatcaagactgaagtgaatgagatgcctgttgaggttatctttaca
gaagattccaaagttagaataaagcaggatgatgtggaagtgtttgatgaagaggttgat
tgtacagtgacacccagtatgccaacaagcattgatggtgacatgtcagaatcaacaaca
tcactacccggagaatgtcataatgttgctggagctcctacaggcttcgattcggacatg
ttccgcacaggcagtgctgattctcatgggaaatcccacaaaagcaagaagaagaaaaag
gataaaaaacacaagaagcataagaagcataagcatgagcataaagacaaagataagctt
gacaaacttgacaagttcattcaagaggaaaacttgagttcaggttcatcaaacccacca
agcccagcttctccaaatatgccaagcagtatgacgttctaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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