KEGG   Paenibacillus vortex: PVOR_13254
Entry
PVOR_13254        CDS       T05385                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pvo  Paenibacillus vortex
Pathway
pvo00300  Lysine biosynthesis
pvo00470  D-Amino acid metabolism
pvo01100  Metabolic pathways
pvo01110  Biosynthesis of secondary metabolites
pvo01120  Microbial metabolism in diverse environments
pvo01230  Biosynthesis of amino acids
Module
pvo_M00526  Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
pvo_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pvo00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PVOR_13254
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PVOR_13254
Enzymes [BR:pvo01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     PVOR_13254
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: EFU41335
UniProt: A0A2R9SVE4
Position
13181..14512
AA seq 443 aa
MFLHGTSKINDQGHLEIGGCDTSDLKAQYGTPLYIVDEQSVRNRCREYIEAFNASGLKFQ
VAYASKAFCVMAMCRLADEEGMSLDVVSDGELYTALQAGFPAERIHFHGNNKTPEEIEMA
LDAHIGCFVVDNVIELHMLQAIAAEKNRTVNILLRVTPGVEAHTHEYISTGQTDSKFGFD
IGNGSAYEAVKLAEAQGNINLMGIHSHIGSQIFEVEGFQMAVQRVAEFASSVKEGLGVVF
KVVNLGGGFGIRYVDGDTPLQVSQYVKAITDAVKTHFAGLGSELPEIWVEPGRSIVGDAG
TTLYTVGTSKDIPGVRKYVAVDGGMTDNPRPALYESKYEAVLANRANDKVEETVSIAGKC
CESGDMLIWDLDLPKVETGDLLAVSCTGAYNYSMASNYNRIRKPAVVFVKDGQSNLVVRR
ESLADIISNDIVPANVAKETVTS
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgtttttacacggtacaagtaagatcaacgatcaggggcatttggaaatcggcgggtgc
gacacatccgatttgaaagctcaatatggaacaccactatatattgtagacgagcagtcg
gtgcgcaaccgctgtcgggaatatatcgaggcattcaatgcttccgggttgaaattccaa
gtcgcgtatgcaagcaaggcgttttgcgtcatggctatgtgccgcttggcggatgaggaa
ggcatgtcgcttgacgtggtttccgatggcgagctgtacacagcgctgcaagcaggattt
cctgcggaacggattcatttccacgggaacaataagacgccggaagagattgaaatggcg
cttgatgcacatatcggctgttttgtagtggataacgtgattgaactgcacatgctgcag
gccattgcagccgagaagaaccgcaccgttaacattctgcttcgcgtgacaccgggtgtt
gaggctcatacgcatgagtatatctccacaggtcaaaccgactccaagtttggttttgat
atcggtaacggctccgcatatgaagcggtaaagcttgcagaagcacaagggaacattaac
ttgatgggcattcattcccacatcggctcccagatttttgaggtggaaggcttccagatg
gccgttcagcgtgttgccgagtttgcttcttctgtaaaagaaggcttgggcgttgtgttc
aaggttgtaaatcttggcggcgggtttggtatccgttatgtggatggagacactccgctt
caagtatcccagtatgtaaaagcgattacggatgcggtgaaaactcactttgctggtctg
ggttccgagcttcctgaaatttgggtggagccgggccggagcatcgttggcgatgcaggc
accacgctgtacacggtgggcacaagcaaggatattccaggcgtacgcaaatatgttgcc
gtagatggcgggatgacggacaatcctcgtccggcgttgtatgaatcgaaatatgaagca
gtgcttgccaaccgtgctaacgataaggttgaagaaaccgtgtccatcgctggcaaatgc
tgtgagagcggggatatgctcatctgggatctggatcttccgaaggtagagacaggtgat
ttgctggctgtatcctgtacaggtgcctacaactactctatggcaagcaactacaaccgt
atccgcaagccggcagtcgtatttgtgaaggatggccagagcaatctggtcgtacgccgc
gagtcgcttgcagacatcatcagtaacgacatcgtgcctgcgaatgtggcaaaagaaacc
gtaacgagctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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