KEGG   Candidatus Planktophila versatilis: A1sIA79_04660
Entry
A1sIA79_04660     CDS       T05250                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
pvs  Candidatus Planktophila versatilis
Brite
KEGG Orthology (KO) [BR:pvs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvs03019]
    A1sIA79_04660
   03009 Ribosome biogenesis [BR:pvs03009]
    A1sIA79_04660
Messenger RNA biogenesis [BR:pvs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     A1sIA79_04660
Ribosome biogenesis [BR:pvs03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    A1sIA79_04660
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: ASY17503
Position
920768..921337
AA seq 189 aa
MATELPHLIWIDCEMTGLDLATDALVEIAVLVTDSELNIIGDGIDLVIQATQEQLSAMGD
FVRQMHTSSGLITEIPNGISIEAAQEQILTYLQAAGCEPGKSPLAGNSVSVDRNFIARDM
HALNEFLHYRTIDVSSIKELTRRWYPKTYFAAPAKTGNHRALGDIRDSIAELAYYRQSVF
IQSEPGQVK
NT seq 570 nt   +upstreamnt  +downstreamnt
atggccaccgaactcccccatctcatctggattgattgcgaaatgaccgggctggatctg
gccaccgatgcactggttgagattgcggtcctggtcactgattcagagctaaatatcatc
ggagacggtattgatctcgtcatccaagcaacccaagagcaactgagcgccatgggagat
tttgtgcgccagatgcacacgagctcgggcctgatcaccgagattcccaatggcatctcg
attgaagccgcccaggagcagatacttacttatctgcaagcagccggatgtgagccaggc
aaatctccactggccggaaactcggtctcggtagaccgcaacttcatcgctcgtgacatg
cacgcactcaatgagttccttcactatcgcaccatcgatgtctcatcgattaaggaactt
acgcgccgctggtatcccaagacttactttgccgccccagccaaaactggcaatcaccgc
gcactgggagatatcagagactcgatcgccgaattggcgtactaccgccagagcgtattt
atccaaagcgagccggggcaggtaaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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