KEGG   Pogona vitticeps (central bearded dragon): 110072038
Entry
110072038         CDS       T05000                                 
Symbol
YTHDC2
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2 isoform X1
  KO
K20099  ATP-dependent RNA helicase YTHDC2 [EC:3.6.4.13]
Organism
pvt  Pogona vitticeps (central bearded dragon)
Brite
KEGG Orthology (KO) [BR:pvt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvt03041]
    110072038 (YTHDC2)
Enzymes [BR:pvt01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     110072038 (YTHDC2)
Spliceosome [BR:pvt03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    110072038 (YTHDC2)
SSDB
Motif
Pfam: YTH HA2_C OB_NTP_bind Helicase_C R3H DEAD HA2_N Ank_2 AAA_19 AAA_22 nSTAND3 Ank ATPase Ank_4 PhoH AAA_7 AAA_16 AAA_23 AAA_29 SRP54 T2SSE
Other DBs
NCBI-GeneID: 110072038
NCBI-ProteinID: XP_020635682
UniProt: A0A6J0SH91
Position
Unknown
AA seq 1456 aa
MSRPSSVSPRPPGGGPQTAGPAAASASSASSSGPGGGRAKGLKEIRIDEEVKIAVNIALE
RFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLISKSKGKGANRYLTVKKKDGSELAHAV
MTCNLTLNTKHAIRSLVQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGI
PQIPVKRGESEFDSFRQSLPVYEKQDEIVRIIKENKVVLIVGETGSGKTTQIPQFLLDDC
YKNGIPCRIFCTQPRRLAAIAVAERVAAERREKIGQTIGYQIRLESRVSPKTLLTFCTNG
VLLRTLMAGDSALSTVTHVIVDEVHERDRFSDFLLTKLRDTLQKHSSLKLILSSAALDVN
LFVRYFAGCPVIYIPGRPFEVKEMFLEDILRSTGYTNKEMIKYKKEKLREEKQQTTLTEW
YSAQDNSKLELQRQRAVTNVAEDNDLLDDGGDTVFSQLAEKDVNCLEPWLIKEMDACLSD
IWLHKDIEAFAQVFHLILTENVSVDYRHSDTSATTLMVASGRGFLSQVEQLIGMGANVHI
KSSNGWTALDWAKHFGQTEVIDLLESYCASLESGNLDESSLVHANASELSAEDREILKAY
HHSFDDEKVDLDLIMHLLFNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADNNHR
FQVFMLHSNMQTSDQKKVLKPSPPGIRKIILSTNIAETSITVNDVVFVIDSGKMKEKSFD
ALNCVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQE
LCLHTKLLAPINCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADL
PVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFS
DHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGG
GDIRDVNTNSENWAVVKGALVAGMYPNIVHVDRENIVLTGPKEKKVRFHPTSVLSQPQYK
KIPPANGQVAAIQALPTDWLIYDEMTRAHRIANVRCCSAVTPVTVALFCGSARLPSNALQ
EPSSFRVDGAPNDSSDSEMEDKTTANLAALKLDEWLNFKLDPEAASLLLQLRQKWHSLFL
RRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPMSSEELPVASSWRS
NSSRKSSAEGEFVDDAFNPEKNPPKASLSYDINKEQNSTILRVLMKSASPAFHQPLKFKE
RSVQHSKRSTDDRSDQLSLKSTDSSSYPSPCASPSPPSSGKGSKSPSPRPNMPVRYFIMK
SSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSVVHLVFSVQGSGHFQGFARMSSEIGR
EKSQDWGSTGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDGQELEPQVGEQL
LQLWDRIPLGEKNTAD
NT seq 4371 nt   +upstreamnt  +downstreamnt
atgtcccgacccagcagcgtctcgccccggcctccgggaggtgggccccagacggcgggc
cccgcggccgcctccgcctcgtcggcgtcgtcctctggccccggtggcggccgggccaag
gggctgaaggagattcgcatcgacgaagaagtgaagatcgccgtgaacatcgccctggag
cggttccgctatggggaccagcgagaaatggaatttccatcgtctttgaccagtactgaa
agagcattcattcaccgattgagtcagtctcttggtctgatttccaaaagtaaggggaaa
ggagcaaacagatatctcactgtgaagaaaaaagatggatcagaattggcacatgcagtg
atgacctgtaatttgactctgaatacaaagcatgcaattaggagcctagtacagagattt
cctgtcaccaacaaagaacgcacagagcttttgccgaagacagagagaggaaatgtattt
gctgttgaagcagagaacagagagatgagcaaaacaagtgggcgacttaacaatggtatc
cctcaaatcccagtgaaacgtggagaatcagagtttgattcatttcgacaatctctgcca
gtttacgaaaagcaagatgaaattgttagaattattaaagaaaataaagttgttttgatt
gtgggtgaaactggatcaggaaaaactacacagattcctcagtttctacttgatgactgt
tacaaaaatggaataccctgtcgaatattttgcactcagccaagacgtttagcagcaata
gctgtggctgaaagggttgctgctgaaagaagagagaagattggccagaccattggttat
cagatccgactggaaagcagagtttctccaaagacactgttaacattttgcaccaatggt
gtattacttcgtacactaatggctggagatagtgcactgtcaacagtaactcatgtcatt
gtggatgaagtccatgagagggatcgcttcagtgatttcctgttaacaaagttaagagat
actttacagaaacactcatctttgaaactgatactctctagtgctgctctggatgtgaac
ctgtttgtcagatactttgcaggctgtccagtaatatatataccaggaagaccttttgaa
gtcaaagaaatgttcctggaagacatattaagaagtacaggctatacaaataaagagatg
attaaatacaaaaaggaaaaactgcgagaggagaaacaacagacaactctgactgaatgg
tattctgcacaagacaatagcaagctagaacttcaacgacaaagggcagttacaaatgta
gctgaagataatgatctgttggatgatggcggtgacacagttttcagtcagttggctgaa
aaagatgtcaactgtcttgaaccttggttaattaaagagatggatgcttgtctttctgat
atttggctgcataaagatattgaagcctttgcacaggtgttccaccttattttaactgaa
aatgtcagtgttgattacaggcacagtgatacaagtgcaacaaccttaatggtagcttct
ggaagaggtttcttgagtcaagtagaacagctgattggtatgggagcaaatgttcacatc
aaatcatccaatggctggacagccttggactgggctaaacattttggacaaacagaagtg
attgatctgttggagtcttattgtgcctcactagagtctggtaatctagatgaaagttcc
ttggtccatgctaatgcaagtgaacttagtgctgaagatcgagaaatcctgaaagcttat
catcacagttttgatgatgaaaaggtggatcttgacttgatcatgcacttgctgttcaat
atctgtcatagctgtgatgcaggagcagttttaatttttcttcctggatatgatgagatt
gttggcttgagggatcgcattctatttgatgacaaaaggtttgccgataacaatcacaga
ttccaagtttttatgttgcattcaaatatgcagacatctgatcagaagaaagtgttaaag
ccctcacctccaggcatacgcaaaataatactttctacaaatattgctgaaacaagtatc
acagttaatgatgttgtctttgtgattgattccggaaaaatgaaggagaagtcctttgat
gcattgaactgtgtaacaatgttaaagatggtatggatttctaaagctagtgccattcaa
aggaagggcagggcaggacgttgtcgacctggaatttgtttccgacttttcagtagacta
aggtttcaaaatatgctggaatttcagactccagagcttctaagaatgcctctgcaggag
ctttgtttgcatacaaaactgctagctcctatcaattgtccaattgctgactttttaatg
aaagctccagagccgccacctgctttaattgtgagaaatgctgtgcagatgcttaagaca
atagatgctatggatacctgggaggatctgacagaacttggctatcatctggctgactta
ccagtcgaaccccaccttggtaaaatggtcttatgcgctgttgttctcaagtgcctggat
cctattctgaccattgcgtgcacccttgcatatcgtgacccttttgtgctaccaacacag
gcctctcaaaaacgtgcagccatgctgtgtagaaaacggtttactgcaggaacatttagt
gatcatatggcccttctcagggcttttcaggcatggcagaaggcacgaagtgatggctgg
gaaagagctttttgtgagaagaacttcctttctcaggcaacaatggagattatcatagga
atgagaacacagttgcttgggcagctcagagcatcaggttttgtaagagccagaggtggt
ggagatataagagatgttaatacaaactcagagaactgggctgtggtcaaaggtgcctta
gtagctggaatgtatccaaatatagttcatgttgacagagagaacattgtgttgactggg
ccaaaagagaaaaaagtgcgatttcatcctacctcagttctgagccaaccacagtataaa
aagattcctccagctaatggccaagtggcagctattcaggcactccctacagactggctt
atatatgatgaaatgacaagagcccaccgaattgctaatgtcaggtgctgttcagctgtg
actccagtcactgtagccctcttctgtggatcagctagattgccaagtaatgctttgcag
gagccttcatcgttcagagtagatggtgctcctaatgatagcagtgacagtgaaatggaa
gacaaaacaacagctaatttggctgcattgaaactggatgaatggctcaatttcaaacta
gatccagaggctgccagcctcctcctccaactgagacagaaatggcacagcttatttctc
cggcggatgagagcgccttcaaagccctggtctcaggttgacgaggcaactatacgagcg
atcattgctgtgttgagcactgaagaacagtctgcaggtctgcagcagccttctggaatc
ggacagagacccaggcccatgtcatctgaagaacttcctgtagcatcttcgtggagatca
aactctagtcgaaaaagctcggcagaaggagaattcgtagatgatgcatttaatcctgaa
aaaaatccccccaaagcgtctttaagttatgatataaacaaagagcagaacagtacaata
ttaagagttctaatgaagtctgcatctccagcatttcaccaaccactgaaattcaaagag
agaagtgtccagcattccaaaagaagcacagatgacaggtcagaccagttatctctgaaa
tctacggacagtagcagttaccccagcccctgtgccagtccctctcctccatcatctgga
aagggctcgaagtctccttccccacggccaaatatgcctgttcgatactttattatgaaa
agcagcaatttgaggaatcttgagatttcacagcagaagggaatttggtctacaacccca
agtaatgagcgaaagctgaatcgagccttttgggagagcagtgttgttcacttggtgttt
tctgttcaaggctcaggccatttccagggttttgctcgaatgtcttcagagataggtcgt
gaaaaaagccaagactggggctctacaggtttaggaggagtattcaaagtggaatggatc
cgtaaggaaagccttccctttcagtttgctcatcatttgctaaatccttggaatgacaac
aagaaagtacaaataagtcgagatggccaggaattggaacctcaggttggtgaacaactg
ctacagttgtgggaccgtattcctttaggggagaaaaacacagctgattga

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