KEGG   Pogona vitticeps (central bearded dragon): 110074164
Entry
110074164         CDS       T05000                                 
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
  KO
K19036  ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]
Organism
pvt  Pogona vitticeps (central bearded dragon)
Brite
KEGG Orthology (KO) [BR:pvt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pvt03009]
    110074164 (IGHMBP2)
   03012 Translation factors [BR:pvt03012]
    110074164 (IGHMBP2)
Enzymes [BR:pvt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     110074164 (IGHMBP2)
    5.6.2.5  RNA 5'-3' helicase
     110074164 (IGHMBP2)
Ribosome biogenesis [BR:pvt03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   110074164 (IGHMBP2)
Translation factors [BR:pvt03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    110074164 (IGHMBP2)
SSDB
Motif
Pfam: AAA_11 AAA_12 SMUBP-2_HCS1_1B R3H AAA_19 AAA_30 zf-AN1 Viral_helicase1 ResIII Helicase_RecD nSTAND3 AAA_16 DEAD Flavi_DEAD AAA_22 SLFN-g3_helicase UvrD-helicase IstB_IS21 AAA AAA_25 Zot PhoH UvrD_C_2 NTPase_1 AAA_33
Other DBs
NCBI-GeneID: 110074164
NCBI-ProteinID: XP_020639747
UniProt: A0A6J0STQ5
Position
Unknown
AA seq 983 aa
MATPVEKFVLRQLELLQEEREAEISEARIWQESISLKELQRRGICLLKLEVTSQKTGLYG
RLLLTLQPRKHGSESQLPSNSFGPGDIVGLYESGGPGDQLCTGTITHITSKLITVAIDEP
QSNLVSLDQENVYRLLKLANDVTYKRLKRALNALSQYQSGPASGLIDILFGGAEPREVGN
TKLLKFYNASLDVSQKEAVCFSLAQKELAIIHGPPGTGKTTTVVEIILQAVQQGLKVLCC
APSNIAVDNLVERLAGHKIRILRLGHPARLLESIQHHSLDAVLARGDNAKIVTDIRKDID
QAFVKTRKTQDKGERGHFLNEIKILRKELKEREEMAMTEILKQANVVLATNTGASSDGPL
KLLPENHFDLVVIDECTQALEASCWIPLLKVKKCVLAGDHKQLPPTIISHKAATKGFSLS
LMERLIQMYGNRIVKMLTVQYRMHQAIMQWASDEMYDGRLSAHHSVAQHLLKDLPGVAYT
EETSIPLLLIDTAGCGLFELDVEDEQSKGNQGEVCLVGLHVQALVEAGVKTRDIAVITPY
NLQVEMLRDLLCHKYPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAV
TRARRHVTVICDSRTAGNHSFLRRLLDYMREHGEVRTAFEYLDDIVPENYAPKSSQEKKL
KCNTALAPKGEKPRGKPVKQTEERPVECPGQNAAKVTAAGTEIKENSCKHKARILEFLES
DETQLNFPPSLNSHDRLIIHQLAEEYGLQHVSLGEGKERYISVRRKGPAINLSVEDAGAC
KQETSDRSPSPLRETSVLSEEKRESNTRTRKVDLKTLHMERVQREKDRKQAREKQSLELR
ADLQEVTRRKHKSEAKGKATLKSKVEDAAEEDFDAMISAAIKDDNTCSFFKCKASIATLG
QLCPHCNKRYCLSHHIPEIHGCGEKAKAHARQRISREGVLYAGSGVKDKSLDPTKRAHLQ
RRLDNKLSELSSQRTRKKKSKEK
NT seq 2952 nt   +upstreamnt  +downstreamnt
atggcgacgccggttgagaagtttgtcctccggcagctggagttgcttcaggaggaaaga
gaggccgagatttcggaagcaaggatatggcaggagagcatctccctgaaagaactgcag
cgaagaggaatatgcttgctgaaacttgaagtaaccagtcaaaaaactgggttgtatggc
cgtctgcttctaactttacaacctagaaaacatggttccgagtcacagctgcccagtaac
agctttgggcctggtgacattgtgggactttacgaaagtggcggcccaggggatcagctc
tgcacgggaactatcacccacataacctccaaattaattactgttgcaattgatgagcct
cagagcaaccttgtaagcttggaccaagagaatgtctatcgtctgctgaaacttgccaat
gatgtcacctacaaaaggcttaaaagggctttgaatgcacttagtcagtatcaatctggt
ccagcatctggtctcattgacatcctttttggtggtgctgagcctcgtgaagttggcaat
acaaagctgttgaagttctacaatgcatcactggatgtctcccagaaggaagctgtttgc
ttctcactggcacagaaagaacttgccatcatccacggaccacctggaactggcaagacc
acaacggtggtcgagataatactccaagctgtgcagcaaggcttgaaagttctgtgttgt
gctccatcgaacattgcagttgacaacttggtagaaagactcgctggccataaaatccgg
attctgcgccttggccacccagctcgtctcttggagtccatacagcaccattcgcttgat
gcagtcttggcacgtggggataatgccaagattgtaacagatattaggaaggatattgat
caagcatttgtaaaaaccagaaaaacccaagacaaaggggagagaggccattttctaaat
gagattaagatcctgagaaaggagctgaaggaacgagaggaaatggctatgactgaaatc
ctgaaacaagctaatgttgttcttgcaacaaatacaggagcctcttctgatggtccactg
aagctacttcctgagaaccattttgatctggtggtgattgacgaatgcactcaagctctt
gaagcaagctgctggatacctctgctgaaggtcaaaaaatgtgtcctggctggagatcat
aagcagctgcctcccacaatcatctcacataaggctgctacgaagggtttttccctcagc
ttaatggagcgactgattcagatgtatggcaaccgcattgtgaagatgctcactgtgcag
tatcgaatgcaccaggccattatgcaatgggcttctgatgagatgtatgatggccgcctc
tcagctcaccattcagttgcgcaacatttactgaaggatctgcctggagtggcctacaca
gaagaaactagtattccattgctgctcatagatactgcaggctgcggcttatttgagctt
gatgtggaagacgaacagtcaaaaggaaaccaaggggaggtatgtcttgttggcttgcat
gtacaagctttggtagaagctggtgtgaagacaagagatattgctgtcattaccccttac
aacctccaggtagaaatgctaagggaccttttgtgtcataaatatccagagctggagatt
aaatcagtggatggcttccagggaagagagaaagaggctgttgtcctctcttttgtgaga
tcaaatagaaaaggtgaagtgggcttccttgcagaggaccgaagaataaatgttgcagtt
actcgtgcccggcgccacgtaactgtgatctgtgactctcggactgctggcaaccacagt
tttcttagacggcttttggattatatgagagaacatggagaagtacgcacagcctttgaa
tacctggatgacattgtgccagaaaactatgctcccaaaagctcacaagaaaagaaactt
aaatgcaacactgcattggccccaaagggtgagaagccacgagggaaaccagttaagcag
actgaggagaggccagtagaatgtcctgggcagaatgcagccaaggtgacggcagcagga
actgagataaaggaaaattcatgtaagcacaaagcaagaatattggagtttctggagagt
gatgagacccaattaaatttcccaccatcattaaattctcatgataggttgattatccac
cagctggcagaggaatatggactgcagcacgtaagcctgggagaaggtaaagagagatac
ataagtgttcgtaggaaaggtcctgctataaacctatctgtagaagatgcaggggcctgt
aaacaggaaacatctgacagatctccaagtcctctgagagaaacgtctgtcctcagtgag
gagaagagagaaagcaacactaggacgaggaaagtggatctgaaaactttgcacatggaa
cgggtacaaagagagaaggacagaaagcaggcaagagaaaaacaaagcctggagctgcgt
gcagatctgcaggaagtcaccagaagaaaacataaaagtgaagccaaagggaaggccact
cttaaaagcaaagtggaagatgcagctgaggaagactttgatgctatgatttctgccgcc
attaaagatgacaacacgtgcagtttcttcaaatgcaaagcaagcatagcaaccctggga
cagctgtgcccccactgcaataaacgttactgtctcagccaccacattccagagattcat
gggtgtggggagaaagccaaagcacatgctcggcaaagaatcagcagagaaggtgtcctg
tatgctgggagtggagtgaaggataagtccttggatcctaccaagagagctcatctccag
aggcgtttggacaacaaactaagtgaactcagtagccagagaacacgcaaaaagaaaagc
aaagagaaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (25)   
   Pfam (25)   
All databases (65)   

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