KEGG   Pogona vitticeps (central bearded dragon): 110075818Help
Entry
110075818         CDS       T05000                                 

Gene name
ATG16L1
Definition
(RefSeq) autophagy-related protein 16-1 isoform X1
  KO
K17890  autophagy-related protein 16-1
Organism
pvt  Pogona vitticeps (central bearded dragon)
Pathway
pvt04136  Autophagy - other
pvt04140  Autophagy - animal
pvt04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:pvt00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    110075818 (ATG16L1)
   04136 Autophagy - other
    110075818 (ATG16L1)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    110075818 (ATG16L1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvt04131]
    110075818 (ATG16L1)
   03029 Mitochondrial biogenesis [BR:pvt03029]
    110075818 (ATG16L1)
Membrane trafficking [BR:pvt04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    110075818 (ATG16L1)
 Others
  Rab GTPases of specific organelles
   Auto phagosome
    110075818 (ATG16L1)
Mitochondrial biogenesis [BR:pvt03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    110075818 (ATG16L1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: ATG16 WD40 ANAPC4_WD40 eIF2A Nup160 Fez1 V_ATPase_I KASH_CCD DUF2332 Lipoprotein_6 SGL HTH_6 ERM
Motif
Other DBs
NCBI-GeneID: 110075818
NCBI-ProteinID: XP_020643052
Position
Unknown
AA seq 623 aa AA seqDB search
MSSGHKTGSFPAWKRHILDELRRRDRLQRQAFEEIILQYNKLLEKSDFHTVLADKLQVEK
YDLPSRHEISPGHDGARNDAHLQEIAQLRIKHQEELTELHKKRGELAQSVIDLNNQIQQK
DKEMQLNNAKIAEYLQKISEMETECQDLRNKLQDLERANQTLKDEYDALQITFTALEEKL
RKTTEDNQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVLADETAEAADETSPVRTVTRTSSKRLSQPAGGLLDSITNIFGLSESPLLGHHSSDTAR
RRSLSSCPAPQDNVDVQPGAIKEVRVPNTAVCVFDAHDGEVNAVQFSPGSRLLATGGLDR
RVKLWEVSGDNSELKGSLSGSNAGITSVEFDSAGSYLLAASNDFASRIWTVDDHRLRHTL
TGHSGKVLSAKFLLGNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDLVCTEQCVMS
GHFDKKIRFWDIRTQCVVREIELLGRITALDLNPERTELLTCSRDDLLKIIDLRVNNVRQ
TFSAQGFKCGSDWTRVVFSPDGNYVAAGSAEGSLYIWNVLTGKVERVLSKQHSNSINAVA
WSPSGAHVVSVDKGNKAVLWSEF
NT seq 1872 nt NT seq  +upstreamnt  +downstreamnt
atgtcttcgggacacaaaacagggagcttccccgcctggaagcggcacatcctggatgaa
ctgaggaggcgggatcggctacaaaggcaggcttttgaagagatcatcttacaatataat
aagctcctggagaagtcagatttccatacagtgctggcagacaaactacaagtggaaaag
tatgacttaccaagtcggcatgaaatcagtccaggacatgatggggcaagaaatgatgct
catttgcaagaaatagcccagctgagaatcaaacatcaagaggaactaaccgagttgcac
aagaaacgtggtgagttggcccagtctgttatcgatctgaacaaccaaatacaacaaaag
gacaaagaaatgcagctaaataatgcaaagattgcagaatatttgcaaaagatatctgaa
atggagacagagtgccaggatctgcgcaacaagttacaagatcttgaacgagccaatcaa
actctcaaggatgaatatgatgctctccagatcacctttactgctcttgaagaaaaatta
agaaaaactactgaagacaatcaagagctggtaacacgctggatggcagagaaggctcaa
gaagctaatcggctcaatgcagaaaatgagaaggattcaagaagacgacaagctaggctt
cagaaggaactagcagaagccgcaaaggagccactacctgttgaacaggatgatgatatt
gaagtgcttgcagatgaaacagctgaggcagctgatgagacctctccggtgcggactgtc
acacggacatccagtaagcgactctcccaaccagctggaggccttctggactctatcact
aatatctttggtctgtctgagtctccccttttgggacatcactcttctgatactgccagg
aggcgctctttgtcctcatgtcctgcccctcaagataatgtggatgtacaaccaggtgca
atcaaagaggtgcgagttcctaacactgcagtgtgtgtctttgatgctcatgatggggag
gtgaatgcggtgcagttcagtcctggctctcggttactggcaacaggcggcttggacagg
agagtcaaactctgggaagtctctggagacaacagtgaattgaaaggctccttgtctggc
agtaatgcggggattacaagcgtagagtttgatagtgccggttcttatttattagcagct
tcaaatgattttgccagcaggatctggactgtagatgatcatcggttacggcacacactc
acagggcatagtggaaaagtcttatcagctaaattcctcttgggcaatgcacgcattgtg
tctgggagccatgacagaaccctcaagctgtgggacctgcgcagcaaagtctgtataaag
actgtgtttgcaggctccagctgcaatgatctagtgtgcactgagcagtgtgtgatgagt
gggcactttgacaagaaaattcgtttttgggatattcgaactcagtgtgtagtacgggaa
attgaattgctgggtagaattaccgctttagatctgaatccagagagaacagaactcctc
acctgttctcgagatgatctattaaagattattgatctcagagtcaataatgtcagacag
acttttagtgcccaggggtttaaatgtggatctgattggaccagagttgtattcagcccc
gatggaaactatgtggcagctggctcagcagaaggatcactctatatttggaatgtgctc
actggaaaagtggaaagggtgctttccaaacagcacagtaactccatcaatgctgtagca
tggtcaccctctggagcccatgtggtcagtgtggacaaaggaaacaaggctgtgctgtgg
tctgaattttga

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