KEGG   Pogona vitticeps (central bearded dragon): 110090269
Entry
110090269         CDS       T05000                                 
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B
  KO
K14328  regulator of nonsense transcripts 3
Organism
pvt  Pogona vitticeps (central bearded dragon)
Pathway
pvt03013  Nucleocytoplasmic transport
pvt03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pvt00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110090269 (UPF3B)
   03015 mRNA surveillance pathway
    110090269 (UPF3B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvt03019]
    110090269 (UPF3B)
Messenger RNA biogenesis [BR:pvt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     110090269 (UPF3B)
   mRNA cycle factors
    P-body specific factors
     110090269 (UPF3B)
SSDB
Motif
Pfam: Smg4_UPF3 RRM_1
Other DBs
NCBI-GeneID: 110090269
NCBI-ProteinID: XP_020669539
UniProt: A0A6J0VFR5
Position
Unknown
AA seq 443 aa
MKRQLPPSSKLWILEHVVIRRLPPSLTKEQLEEHLQPLPEHDYFEFFANDSSLYPHMFSR
AYINFKNQEDIVLFRDRFDGYVFVDHKGLEYPAIVEFAPFQKAAKKKNKKKDAKAGTIED
DPEYKKFLESYSADDEKLTSTPETLLEEIEARNKELIAKKTTPLLNFLKNKQRLREEKRE
ERRRRELERKRQREEERRKWKEEERRKRKEAEKTKKVERCPEKERDRSKDEPKIKLLKKP
EKDERDFEKKDKAKKLEKECVREEKGASSVSSVSAKLCDGEMKEEKAKRLEDDCGKDYRE
REREYDRDREYERIQRDRDKFRRQEEERRRQKERFEKEKVFRRKEEDVKKDRDSLREKGK
RAELADYMGNTEKPEKVTKEDKKDDTTKRDRIRNKDRPAMQLYQPGARSRSRLSAYDESS
AKSPDQAAEKKQECETSNTKEEE
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgaagcgacagttgcccccaagcagcaagctctggattttggagcatgtagtgattcga
cgtctgcctcccagtttgactaaggaacaacttgaagaacatcttcagcctttgcctgaa
catgactattttgaattctttgctaatgattccagtttgtaccctcacatgttttccaga
gcatacatcaactttaaaaaccaagaagatatagttctgttcagggatcgctttgatggt
tatgtttttgttgatcacaaaggtctagaatatcctgccatagtggaatttgcacccttt
cagaaagctgccaaaaagaagaataagaaaaaggatgccaaagcggggaccattgaagat
gatccggagtacaagaaattcttggaaagctatagtgctgatgatgaaaaattaacatct
actcctgagacgttactagaggaaatagaggcaagaaacaaagaattaatagcaaagaaa
acaactcctctgctgaacttcttgaagaacaagcagagacttagagaagagaaacgagag
gagagaaggaggagagaactagagaggaaaagacaaagggaggaagaaaggaggaaatgg
aaagaagaagaaagaaggaagagaaaagaagctgaaaaaacaaaaaaagtggagaggtgt
ccagaaaaagaaagggacagatcaaaggatgaaccaaagattaagctacttaagaagcca
gaaaaagatgaaagagacttcgaaaaaaaggacaaggccaagaaactggagaaagagtgt
gtgagggaagaaaagggtgccagctcggtcagcagtgtgtcagccaagctctgcgatggg
gaaatgaaagaggagaaagccaaaagattagaagatgactgtggaaaagattacagggag
agagagagagaatatgaccgagacagagaatatgagagaatccagcgagacagagataaa
tttcgacgccaagaagaagaacgtcggagacaaaaggagcgttttgagaaagagaaggtt
ttcaggaggaaggaggaagatgtgaagaaggacagagactccttgcgtgagaaaggaaag
agagctgaattagcggactacatgggcaataccgagaaacctgagaaagtaaccaaagaa
gataaaaaagatgatacaaccaagagggatcgcattagaaacaaggatcgtccagccatg
cagctatatcagcctggagctcggagtcgaagtcgtctgtctgcatatgacgaaagttct
gcaaagtcccctgatcaagcagcagaaaaaaagcaggaatgtgaaaccagtaacacaaaa
gaggaagagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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