KEGG   Phaseolus vulgaris (common bean): PHAVU_001G123100g
Entry
PHAVU_001G123100g CDS       T03093                                 
Name
(RefSeq) hypothetical protein
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
pvu  Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvu03032]
    PHAVU_001G123100g
   03400 DNA repair and recombination proteins [BR:pvu03400]
    PHAVU_001G123100g
Enzymes [BR:pvu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     PHAVU_001G123100g
DNA replication proteins [BR:pvu03032]
 Prokaryotic type
  DNA Topoisomerases
   PHAVU_001G123100g
DNA repair and recombination proteins [BR:pvu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      PHAVU_001G123100g
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook TOPRIM_C
Other DBs
NCBI-GeneID: 18641186
NCBI-ProteinID: XP_007162090
UniProt: V7CVC4
Position
1:complement(34555524..34572472)
AA seq 724 aa
MAQVLLYRPPLLRFMSSRFFTCSSFHTRFSSLPPSTLTKTRTSFHLRKIWVPCSVPIAAT
PRAFMSSVPTTEAFQKSESSTAYGSDQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEI
LDNAVDEAQAGFASRIDVVLLADDSLSITDNGRGIPTDLHPVTNKSALETVLTVLHAGGK
FGGANSGYSVSGGLHGVGLSVVNALSESLEITVWRDGMEYTQKYSRGKPVTILKCLVLPD
EKKDFRGTRVRFWPDKEVFTTAIQFDYNTIAGRIRELAFLNPKLTITLQKEDNDPDKAQY
NKYFYAGGLVEYVKWLNADKKTLHDVLSFRKETDGITVDIAFQWCEDAYSDTILGYANSI
RTIDGGTHIEAMKASITRTLNGLGKKSKVIKDKDITLSGEHVREGLTCVVSVKVPNPEFE
GQTKTRLGNPEVRKVVDQSIHDYLTEYLELHPDVLDSILSKSLNAFKAALAAKRARELVR
QKSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNI
ERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIILTDADVDGAHIRTLLLTF
FFRYQKALFDEGCIYVGVPPLYKVVRGKQVHYCYDDADLKKLQRSFPPNASYNMQRFKGL
GEMMPLQLWETTMDPKRRLLKQLKVEDAAEANVVFSSLMGTQVDIRKELIRNSASMIDLH
QLDI
NT seq 2175 nt   +upstreamnt  +downstreamnt
atggctcaagttcttctatatcgccctcctctgttacgcttcatgtcttctcgcttcttc
acctgctcttccttccatacgcgtttttcttctctccctccttctactctcaccaaaacc
aggacgagttttcatctgagaaaaatttgggttccctgttcggttccaattgcggctact
ccaagggcgtttatgtcttctgtccctaccactgaagcttttcagaaaagtgaaagttcc
acagcttatggttctgatcaaattcaggtgcttgaaggcttggaccctgtgaggaaaagg
cccgggatgtacattggaagcaccggccctcgagggttgcaccatttggtgtatgaaatt
ttggataatgctgttgatgaagctcaagctgggtttgcttccaggattgatgttgttttg
cttgcagatgattctttgagcatcaccgacaatggtcgtgggattcctactgacttgcat
ccagttactaataaatctgccttggagacagtgttgacggtcttgcacgctggtggaaaa
tttggtggtgccaacagtgggtactctgtttcaggaggtttgcatggcgttggtttgtct
gttgttaatgccttgtcagagtcactggagataacagtttggcgtgatggaatggaatac
acacaaaaatattctcgtggaaagccagtgacaattctaaaatgccttgtgcttccagat
gaaaagaaagattttcgagggacacgtgttagattttggcccgacaaagaagttttcacc
actgctattcagtttgattacaacacaatagctggacggattagggagttagctttcctc
aacccaaagcttacaatcacacttcagaaagaggataatgatccagataaagctcagtat
aacaaatatttctatgctggggggttggttgaatatgtgaaatggctcaatgcagataag
aaaacacttcatgatgttctgagttttagaaaagaaactgatggcatcacagttgatata
gcttttcaatggtgtgaagatgcatattcagatacaatactgggatatgctaatagtata
cgcactattgatggtggcactcatattgaggccatgaaggcttctataacaagaacactg
aatggtctaggaaagaagtcaaaagttattaaggataaggatattactttaagtggtgag
catgttagagagggtctaacatgtgttgtctcagtcaaggtcccaaaccctgagtttgaa
ggacaaacaaagacaagattaggaaatccagaggtgcgaaaagtggttgatcaatctatt
cacgactatcttactgagtatttagaattgcatcccgatgtgcttgattcaatactttct
aaatctcttaatgcttttaaggcagctctggcagcaaaaagagcaagagaattggtgaga
caaaagagtgtattgagatcttcatctcttccgggaaaactagctgattgttcatcttca
aatcctgaagattgtgaaatatttatagttgaaggtgattcagctggaggaagtgctaag
caagggcgtgacaggcgcttccaggccattctccctctgaggggtaagattctgaatatt
gaaaggagggatgaagcagcaatgtacaaaaatgaagagatccaaaatttaattctgggt
cttggtctcggtgtgaagggagaggattttaaaaaggatgcactccggtatcataagatt
attattttgactgatgctgatgtggatggtgctcacatccgaactttgctactgacattt
ttcttcagatatcagaaagctttgtttgatgaaggttgtatttatgttggtgttccaccg
ttatacaaggttgtcaggggaaaacaagtgcactattgctatgatgatgctgaccttaaa
aagcttcaacgatcattccctcctaatgcatcgtacaacatgcaaaggttcaaagggttg
ggagagatgatgcctttacaactatgggaaacaaccatggatccaaaacggaggttactg
aagcaattaaaagttgaggatgcagcagaagcaaatgttgttttttcctctcttatgggt
actcaggtggatattcggaaggagctcatacgaaattctgcaagcatgattgatcttcat
cagctagatatttga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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