KEGG   Phaseolus vulgaris (common bean): PHAVU_002G062200g
Entry
PHAVU_002G062200g CDS       T03093                                 
Name
(RefSeq) hypothetical protein
  KO
K08341  GABA(A) receptor-associated protein
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    PHAVU_002G062200g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvu04131]
    PHAVU_002G062200g
   04121 Ubiquitin system [BR:pvu04121]
    PHAVU_002G062200g
   03029 Mitochondrial biogenesis [BR:pvu03029]
    PHAVU_002G062200g
Membrane trafficking [BR:pvu04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    PHAVU_002G062200g
Ubiquitin system [BR:pvu04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   PHAVU_002G062200g
Mitochondrial biogenesis [BR:pvu03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    PHAVU_002G062200g
SSDB
Motif
Pfam: ATG8 APG12
Other DBs
NCBI-GeneID: 18637115
NCBI-ProteinID: XP_007157342
UniProt: V7CGM8
Position
2:complement(6879123..6882733)
AA seq 131 aa
MSRSYFKQEHDLEKRRAEAAKIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTIGQ
LVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYNEKKDEDGFLYVTYSGENTFGDFN
SIEQPLQINSI
NT seq 396 nt   +upstreamnt  +downstreamnt
atgtcaaggagctacttcaaacaagagcatgatcttgagaagagaagagcagaggctgcc
aagattagggaaaaatacccagacaggataccggttattgtggagaaggcagaaagaagt
gacattccaagtatcgacaagaaaaagtaccttgtccctgctgacctgactattggacag
ttagtctacgtcatccgcaaaaggatcaaactaagtgcagaaaaggcaatctttatattt
gtggacaacgtccttcctcctacaggagcaattatgtctgccatatataatgagaagaag
gatgaggatgggtttctctatgttacatacagtggcgagaacacctttggggatttcaat
tccattgagcagcccttacaaattaacagcatatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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