KEGG   Phaseolus vulgaris (common bean): PHAVU_003G122200g
Entry
PHAVU_003G122200g CDS       T03093                                 
Name
(RefSeq) hypothetical protein
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
pvu  Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pvu03016]
    PHAVU_003G122200g
Enzymes [BR:pvu01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     PHAVU_003G122200g
Transfer RNA biogenesis [BR:pvu03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    PHAVU_003G122200g
 Prokaryotic type
    PHAVU_003G122200g
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 18634681
NCBI-ProteinID: XP_007154477
UniProt: V7CC41
Position
3:30118998..30121003
AA seq 322 aa
MSYAIGALLAPSSSPTFLPLVNSTASVELEQGVKPIEDGYKWRLVLAYEGTRYSGWQYQQ
SPPTVQCALEKALTQATKLQRKDLSLVGASRTDAGVHAWGQVAHFFTPFNYDNLEDIHAA
LNGLLPSDIRVREISPASAEFHARFSVKSKIYHYKIYNDSIMDPFQRHFAYHSIYKLNSA
VMKEATKYFVGKHDFSAFANSSHNDRVPDPVKHIFRFDLKEMGALLQLEVEGTGFLYRQV
RNMVALLLQIGREAIPPNIVAHILESRDREELAKYSLSAPPHGLCLVSINYNESHLLPPP
GCPANSFGRYHTIRKCKVPFFL
NT seq 969 nt   +upstreamnt  +downstreamnt
atgagttatgcaataggagcactgcttgctccatcttcatctccaactttcctccctttg
gtgaattccactgcttctgtggaactggaacaaggggtgaagcccattgaagatgggtat
aagtggcgcctggttttggcttacgaaggaacccgatactcaggctggcaatatcaacag
tctccccctactgttcaatgcgctctggagaaagctttaactcaagcaacaaagcttcaa
aggaaggatctcagtttggttggtgcgagcaggactgatgcaggagtccatgcttggggt
caggttgctcatttttttacaccttttaactatgacaatttagaagacattcatgcagct
ctgaatggccttcttccttctgacatccgagttagagagatcagccctgcatcagctgaa
ttccatgctcgattttctgtcaaaagtaagatttaccattacaagatatacaatgatagc
atcatggatcccttccagcggcattttgcttaccatagtatatataaactcaatagcgct
gttatgaaagaagctacaaaatattttgttgggaagcatgatttctcggcctttgccaat
tcatcccacaatgatcgggtgccggatccagtgaagcatatattccgatttgatttgaaa
gaaatgggagctcttttgcaacttgaggttgaaggcacaggtttcttgtatagacaagtc
cgaaacatggtggctttgttgcttcaaattggtagggaagctatccctcctaacattgtt
gcacatattttggaaagtcgagatcgcgaagagcttgcaaaatactcattgtctgcccct
cctcatggcctctgtcttgtttctatcaactacaatgaaagtcacctattgcctccacca
gggtgtcctgcaaacagttttggcaggtatcataccataaggaaatgcaaggttccattc
tttttgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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