KEGG   Phaseolus vulgaris (common bean): PHAVU_004G044600g
Entry
PHAVU_004G044600g CDS       T03093                                 
Name
(RefSeq) hypothetical protein
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03022  Basal transcription factors
pvu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PHAVU_004G044600g
  09124 Replication and repair
   03420 Nucleotide excision repair
    PHAVU_004G044600g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvu03021]
    PHAVU_004G044600g
   03400 DNA repair and recombination proteins [BR:pvu03400]
    PHAVU_004G044600g
Transcription machinery [BR:pvu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     PHAVU_004G044600g
DNA repair and recombination proteins [BR:pvu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     PHAVU_004G044600g
SSDB
Motif
Pfam: MAT1 Phage_TAC_13 NAD_binding_9
Other DBs
NCBI-GeneID: 18632009
NCBI-ProteinID: XP_007151419
UniProt: V7C211
Position
4:5035452..5041546
AA seq 190 aa
MVVSSTNPHNKEIAIRRRICSIFNKREDDFPSLKEYNDYLEEVEDMTFNLIEGIDVSTIE
EKIAKYQEENAEQIMINRARKAEELAAALTASKGQPALTDNDVATNQNSQTGFGAVPQGQ
YAPTFAGGQPRPTGMAPQPLPLGGDMLGFAGDEKEAKRLQAERGARAGGWSVEISRKRAH
EEALGSLWVC
NT seq 573 nt   +upstreamnt  +downstreamnt
atggtggtctctagtacaaatccccacaacaaggagatagccatcaggaggaggatttgt
agcatatttaataaacgtgaagatgatttcccatctttgaaagaatataatgattacttg
gaggaagtagaggacatgacatttaacttgattgaaggaatagatgtttcaaccattgaa
gaaaaaattgctaaataccaggaagaaaatgcagaacaaataatgattaatcgagctcgg
aaggctgaagagttggctgcagctctgacagcaagtaagggacaacctgcactaactgat
aacgatgtggccacaaaccaaaattctcaaacaggatttggtgctgttcctcagggacag
tatgcacctacatttgcaggaggacagcctagacccacaggtatggctccacaaccttta
ccactgggaggtgacatgctgggatttgcaggtgatgaaaaggaagcaaagaggctacaa
gctgagagaggagcaagagctggaggatggagtgtagaaataagtaggaaacgggcacat
gaagaagcccttggaagcctgtgggtttgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system