KEGG   Phaseolus vulgaris (common bean): PHAVU_008G128900g
Entry
PHAVU_008G128900g CDS       T03093                                 
Name
(RefSeq) hypothetical protein
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    PHAVU_008G128900g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvu04121]
    PHAVU_008G128900g
   03036 Chromosome and associated proteins [BR:pvu03036]
    PHAVU_008G128900g
Enzymes [BR:pvu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     PHAVU_008G128900g
Ubiquitin system [BR:pvu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    PHAVU_008G128900g
Chromosome and associated proteins [BR:pvu03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     PHAVU_008G128900g
    Noncanonical PRC1 (PRC1.1)
     PHAVU_008G128900g
    Noncanonical PRC1 (PRC1.3/1.5)
     PHAVU_008G128900g
    Noncanonical PRC1 (PRC1.6)
     PHAVU_008G128900g
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_5 zf-C3HC4_3 zf-C3HC4_5 zf-rbx1 zf-RING_UBOX zf-UDP zf-RING_10 zf-RING_4 zf-RING_6 Prok-RING_4
Other DBs
NCBI-GeneID: 18622713
NCBI-ProteinID: XP_007140636
UniProt: V7B4Z4
Position
8:complement(19619299..19622429)
AA seq 353 aa
IIRNTRIVKECLHRFCKECIEKSFRLGNNECPACRTHCSSRRSLREDTEFDELINLLFPN
IDEYEEKEMAFSDDAKNNIKSMQEAYGKTLERQSDALGKKAAAATTRSKDRYSRSANQPL
RRSSRNATAFSESGSSRDMTLPPVAEERETQVIADSDINEFVIEGQSSQHETTASIVAGV
TCQLQDLISSSDKLVWGRFGLRSHTNARHAASSRSNRLGRFIDHLQNSNQNDDELDICIK
LVSFEEERVPNLARPYLNCRPTLLINQLCQYVASETLLQTEEIELYVVKECEPEFVSGEG
KLDPDKYETQFLEREDQTLSELKTNNLSFGHLVIAYKRKKWNLNEVLSCAGSE
NT seq 1062 nt   +upstreamnt  +downstreamnt
atcattcgaaatacaaggattgttaaggagtgcttgcatcgcttttgcaaggagtgcata
gagaaatcctttcgccttggtaacaatgaatgtcctgcttgtcgtacgcattgttcaagc
cgacgatcactaagggaagacaccgaatttgatgagttgattaatctcctttttcccaac
attgatgaatacgaggaaaaggaaatggctttttctgatgatgcaaagaataatataaag
tcaatgcaagaagcgtatggcaagactcttgaacgacaaagtgatgcactgggaaagaag
gctgctgctgcaacaactaggtcaaaagatagatactcaaggagtgcaaatcaaccgttg
agaagaagttcacgaaatgcaactgcattttccgaatctggttctagcagggacatgaca
ttgcctcctgttgctgaagagagagagacacaagtcatagccgacagtgacataaatgag
tttgtgatagagggacaaagttctcaacatgagactactgcaagcatagttgcaggtgta
acatgtcaattgcaagatctcattagctcatctgataaacttgtatgggggcgatttggc
ctgaggagtcacaccaatgctaggcatgctgcttcttcgaggagcaatcgcttggggaga
ttcattgatcatctgcaaaactccaatcaaaatgatgatgagttggacatctgtatcaaa
cttgtctcttttgaggaggaaagagtgcccaatttggcaaggccataccttaactgcaga
cctacattgttaatcaaccaactgtgccagtatgttgccagtgaaaccttgctgcaaact
gaagaaattgaattgtacgtggtgaaagagtgtgagcccgagtttgtaagtggtgaggga
aagcttgatccagacaaatatgagactcaatttcttgagagagaggatcaaactttgtct
gaactcaaaacaaacaatctcagctttggccatctggtcatagcttataagaggaagaag
tggaacttaaatgaagtgttgtcctgcgctggttctgaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (27)   

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