KEGG   Phaseolus vulgaris (common bean): PHAVU_009G065600g
Entry
PHAVU_009G065600g CDS       T03093                                 
Name
(RefSeq) hypothetical protein
  KO
K13174  THO complex subunit 5
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PHAVU_009G065600g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvu03019]
    PHAVU_009G065600g
   03041 Spliceosome [BR:pvu03041]
    PHAVU_009G065600g
Messenger RNA biogenesis [BR:pvu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     PHAVU_009G065600g
Spliceosome [BR:pvu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    PHAVU_009G065600g
SSDB
Motif
Pfam: FmiP_Thoc5 RWD
Other DBs
NCBI-GeneID: 18619340
NCBI-ProteinID: XP_007136690
UniProt: V7ASZ4
Position
9:complement(11211392..11217899)
AA seq 805 aa
MEDGEIEEGSIGGVEEEERSSEPHKSEESPYEMLRNSKASVENIIADVLAIKKDGKPKQH
LRDLVTQMFLHFITLRQANRSILLEEDRVKTETERAKAPVDFTTLQLHNLMYEKNHYVKA
IKACTDFKSKYPDIDLVPEEEFFRDAPQDIKDSVLSNDAAHNLMLRRLNFELFQRKELCK
LHEKLEQQKKILLQTIANRKKFLTSLPSHLKSLKKASLPVQNQLGLHHTKRLKQHHSAGL
LPPALYVIYSQLFAQKEAFAEPIDLEIIGSLKDAQAFARQQAHKDTDNSTTMESSKLEDD
APDEEEDGQRRRKRPRRVQAKESLDQGGIFQVHPLKIIVHVYEDEDSDSKSAKLITLRFE
YLVKLNVVCVGIEGCNEGPENDILCNLFPNDTGLELPQQSAKLFVQDATTFNSQRTSRPY
KWAQHLAGIDFLPEVSPLLLTEDSGAAKNENVISGLSLYRQQNRVMTVLHRIRDRRKAQL
ALLEQLEFLAKLDWPCLSCKIVPWAFHTPLCNLDSWSPVRLPPVPRESSSPAVIDEEEHV
HEPMDADVNEHSDVTKAEPESITEDGELPTLLPNMSKLDHSTQLNLISKSIVPPLNKIRS
QSFKKYDDSSDFLLDTESDLDEPAQTELEHENILSNYHDRNSVSWMHHGLKEFCLVLCRK
ISADESNVKLEAKIKISMEYPLRPPLFALSIRCISSGEKRDKLGLEWYNELRAMEAEVNL
HILKMLPINQQNYVLAHQVSCLAMLFDYYLDEAFPSSERTNCTSVVDVGLCKPVTGRFLG
RCFRGRDRRKMISWKDMKFNSRCPQ
NT seq 2418 nt   +upstreamnt  +downstreamnt
atggaagacggtgagatagaagaggggtcgataggtggtgtagaggaagaggagcgttcc
tcagagcctcacaagtcggaggaatcgccctacgaaatgttgcgcaatagcaaggcttcc
gtagagaacattatcgccgacgtactcgccattaaaaaggacggaaaacctaaacaacat
cttcgggatctcgttactcagatgttcctacacttcatcactctccgccaggcaaatcgc
tctatcttgctcgaggaagaccgcgtgaaaaccgaaacggagcgtgccaaggcaccggtg
gatttcacaacgctgcagcttcacaacctcatgtacgagaaaaaccactatgttaaggcg
ataaaggcctgcacagacttcaaatcgaaatatcccgacattgacctcgtccccgaggag
gagtttttccgcgacgctcctcaagatatcaaggactccgttttgtcgaacgacgctgcg
cacaatctcatgctccggaggctcaatttcgagttattccagcgtaaagaactctgcaaa
cttcatgagaagctggaacaacaaaagaaaatcctcttgcagactattgcaaaccgaaag
aagttcctgacaagtctcccttcacatctcaaatctcttaagaaggcctccttgcctgta
caaaatcagctaggacttcatcatactaagagattaaagcagcatcattcggcagggtta
cttcctccagccctttatgtgatctactcacagctgtttgctcaaaaggaggcctttgca
gaacccattgatctggagattataggaagcctgaaagatgctcaagcttttgctcgtcaa
caggctcacaaggacactgacaattccactacaatggagagttccaaattggaagatgat
gctcccgatgaagaagaagatggtcagagacggagaaaaaggccacggagggttcaagca
aaggagagccttgaccaggggggaatatttcaagttcacccacttaaaatcattgtccat
gtgtatgaagatgaggattctgattcaaaatctgccaaacttattactctaaggtttgag
tatctggtgaagttgaacgttgtatgtgtcggaatagaaggttgtaatgaaggtccagag
aatgacatcttatgcaatttattccctaatgatacgggacttgagcttcctcagcagtct
gccaaactctttgttcaagatgctacaacattcaattctcaaaggacttcacgtccttac
aaatgggctcagcacctggcggggattgatttcttgcctgaggtgtctcccttgcttctt
actgaggacagtggagcagccaagaatgaaaatgttatatctggtctttcactatatcgc
cagcagaaccgagtaatgacagttctgcacaggattcgtgatagaagaaaagctcaattg
gctcttctggaacagctagaatttcttgcaaagcttgactggccttgtttgtcctgcaaa
attgttccttgggcctttcacactccgttgtgtaatttggatagttggtcacctgtaaga
cttccgcctgtacctagagagtcctcatctcctgctgtcatcgatgaagaggagcatgtt
catgaaccaatggatgctgatgtaaatgaacattctgatgtcacaaaagcagaacctgaa
agtattacagaagatggggagcttccaactttgcttcctaacatgtctaagcttgaccat
tccacacagctgaacttaatttctaaaagtattgttcctccactcaataaaatcaggtca
cagagtttcaaaaaatatgatgacagttctgatttcttgctggatactgaaagtgatcta
gatgaaccagcacagactgaactagaacatgaaaatatattatccaattaccatgacaga
aactctgtgtcatggatgcatcatgggctcaaggaattttgtttagttctttgccgaaaa
atcagtgcagatgagagcaatgtgaaattagaagctaagataaaaatcagtatggaatat
cctctaaggcctcctctttttgcattgagtattcgctgtatatcttctggggaaaagcgt
gataaactaggattagagtggtataatgaactccgtgcaatggaagcagaggtcaatcta
cacatactgaagatgctacctatcaatcaacaaaattatgtactggctcaccaagttagt
tgtcttgctatgttgttcgactattatttggatgaggcattcccatcgtctgaaaggaca
aattgtacttctgtggttgatgttggcttatgcaagcctgttactggtagattcctgggt
agatgttttagaggaagggatcgcaggaagatgatctcctggaaagatatgaaattcaat
tccagatgtccccaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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