KEGG   Pectobacterium parmentieri WPP163: Pecwa_3919
Entry
Pecwa_3919        CDS       T01106                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
pwa  Pectobacterium parmentieri WPP163
Pathway
pwa02024  Quorum sensing
pwa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pwa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Pecwa_3919
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Pecwa_3919
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pwa03019]
    Pecwa_3919
   03036 Chromosome and associated proteins [BR:pwa03036]
    Pecwa_3919
Messenger RNA biogenesis [BR:pwa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Pecwa_3919
Chromosome and associated proteins [BR:pwa03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Pecwa_3919
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: ACX89650
Position
complement(4326517..4326816)
AA seq 99 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNPGGSNNYHGSNTTAQQQSQDADDAE
NT seq 300 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctttacaagatccgttcttgaacgctttgcgtcgtgaacgtgtt
ccggtttcgatttatttggtgaacggtattaagctgcaaggtcagatcgaatctttcgat
caattcgtgattttgttgaaaaacacggtcagtcagatggtttataaacatgccatctct
acagttgttccttctcgcccagtttctcaccatagcaacaatcctggcggcagcaacaac
tatcatggtagtaacacgactgctcagcaacagtcgcaggatgctgatgacgccgaataa

DBGET integrated database retrieval system