KEGG   Pectobacterium wasabiae: A7983_11820
Entry
A7983_11820       CDS       T04535                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pws  Pectobacterium wasabiae
Pathway
pws03410  Base excision repair
pws03430  Mismatch repair
pws03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pws00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    A7983_11820
   03430 Mismatch repair
    A7983_11820
   03440 Homologous recombination
    A7983_11820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pws03400]
    A7983_11820
DNA repair and recombination proteins [BR:pws03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     A7983_11820
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     A7983_11820
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      A7983_11820
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB
Other DBs
NCBI-ProteinID: AOR63932
UniProt: A0A1D7Z212
Position
2599280..2601022
AA seq 580 aa
MITQLRRRPLVEDIDLPDTVPPLLRRLYAQRGVKGAQELERSLSGLLNYRLLSGIDKAID
LLQLALAEKRCIVIVGDFDADGATSTTLAVLALRSMGGTNVKYLVPNRFEDGYGLSPAVV
AQAAALGAELIVTVDNGISSHAGVEDAHRRGISVLVTDHHLPGEALPDADAMINPNLSDC
AFPSKALAGVGVAFYLMMALFVRLRDSDWFTQQGLAKPNLTELLDLVALGTVADVVPLDA
NNRILVAQGLNRIRAGECRPGIRALLEVANRDASQLVASDLGFAIGPRLNAAGRLDDMTV
GVELLLSNDITQARMLANDLDGLNQDRREIEQGMQVEALRLCESLERTRTELPYGLAMYH
PEWHQGVVGILASRIKERFHRPVIAFAPAGDGMLKGSGRSIAGLHLRDALERLDTLYPGM
MDKFGGHAMAAGLSLHETQFEDFRQRFGELVGEWLDPSQLEGVVWSDGELALPELNLLST
AEMLRYAGPWGQAFPEPTFDGCFRILQPRLLKERHLKAMFEPIGVTGTVPLLDGIAFNID
TTIWPDPSIKEVEMAYRLDINEFRGKRSVQLLIQHLWPRA
NT seq 1743 nt   +upstreamnt  +downstreamnt
atgattacccaactccgccggcgtccgctggtggaggatattgatttacctgacaccgtt
ccgcctttactgcgtcgcctctacgcgcaacgtggcgttaaaggcgctcaggagctggaa
cgtagcctgagtggtttactcaattaccgtttactcagcggcattgataaagcgatcgat
ctgctgcaactcgcgctggcagagaagcgctgcatcgtgattgtgggcgactttgatgct
gatggtgccaccagcaccacgcttgccgtactggcgttgcgcagcatgggcggcacgaac
gtaaaatatctggtgccgaaccgctttgaagatggttatgggctaagccccgcggtggtg
gcgcaggctgctgcgttgggagcggagctgattgttactgtggataacggaatctcttcc
catgcgggcgttgaggatgcacatcggcgcggtatctcggtgctggtgaccgatcaccac
ctgccgggcgaagccctgcctgacgccgatgcgatgattaaccccaatctgtcagattgt
gcattcccctctaaggcgttggctggcgtgggggtggcgttctatctgatgatggcgctg
tttgtacgcctgcgtgacagcgactggtttacgcagcaggggctggcgaagccgaatctt
accgaattactggatctggtggcgctgggcacggtggctgatgtggtgccgctggatgcc
aacaaccggattctggtggctcaggggctgaatcgcattcgggctggagaatgtcgtccg
ggcattcgagcgctgctggaagtggctaaccgcgatgccagtcagctagtcgccagcgat
ttaggttttgccatcgggcctcgactcaatgcagccgggcgactggatgatatgacggtc
ggggtcgaactgttattgagtaacgatattactcaggcgcgcatgctggctaacgattta
gatgggttgaatcaggatcggcgcgaaatcgaacagggaatgcaggtcgaagccttgcgc
ctgtgcgaatcgctggaacgtacccgcactgaattaccttacggtctggcgatgtatcac
ccagaatggcatcagggcgttgtgggtattctggcttcacgcattaaagagcgttttcat
cgtccggtgattgcttttgcgcctgcgggcgacggcatgctgaaagggtcgggacgttct
attgccggtctgcatctgcgtgatgcgctggaaagattagatacgctgtatcccggcatg
atggacaagttcggcggacacgcgatggcggcaggactatcgctgcatgaaacgcagttc
gaggatttccgtcagcgcttcggcgaactggtgggcgagtggctcgatccgtctcagctt
gaaggcgtcgtttggtctgatggcgaactggcattgccggagctgaatttgctctcaacg
gcagagatgctgcgttatgcggggccgtggggacaagcgttccctgaaccgacgttcgat
ggttgcttccgcattctgcaaccccgtttgctcaaagaacgccatttgaaagcgatgttt
gaaccgatcggtgtaacaggaaccgtgccgctgttagatggcatcgcgtttaatattgat
accaccatctggcccgatccgagcattaaagaagtggaaatggcgtaccggctggatatt
aacgagtttcgtggtaaacgctcggtgcaattgttgattcaacatctgtggccgcgcgca
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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