KEGG   Pyrus x bretschneideri (Chinese white pear): 103947359Help
Entry
103947359         CDS       T03446                                 

Definition
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Organism
pxb  Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pxb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103947359
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pxb03041]
    103947359
Enzymes [BR:pxb01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     103947359
Spliceosome [BR:pxb03041]
 Complex C
  Other components
   Step II factors
    103947359
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: HA2 OB_NTP_bind Helicase_C
Motif
Other DBs
NCBI-GeneID: 103947359
NCBI-ProteinID: XP_009356540
Position
Unknown
AA seq 366 aa AA seqDB search
MCSCKVVILVTNIAETSLTISGIKYVVDPGFVKARYYDPNKGLESLVVVPISKAQALQSS
GRAGREGPGKCFRVYPEDQFGKLEDSTKAEIKRCNLSNVILQLKALGVDDITGFDFIEKP
SRSAIVKSLEQLFVLGALTDDCKLSNPVGIQMARLPLDPVYSRALIVASEFNCLEEMLIS
VAVLSVESISFNPRDKIEEVRTAQKSFASPEGDHLTLVNVYRASNEFLDKRSGLCKEKRE
KAFWKWCKDNFIHSRSLTNARDIHRQIQGHVEQMGLRITSCGDDVLQFCRCLATSFFLNA
AXDGTYRALAKGEVVSIHPSSVIRNRPECLVYNELVETSRKFIRNTTRIDFLWLTELAPQ
FYAMQN
NT seq 1101 nt NT seq  +upstreamnt  +downstreamnt
atgtgttcgtgtaaagttgtaatattggtaacaaatattgctgagacatcattgacaata
tctggaatcaagtatgttgtagatcctgggtttgtaaaagcacgttactatgatccaaac
aaagggttggaatctttggttgttgtcccaatttcaaaagcacaggctcttcaaagtagt
gggcgtgcagggagagaaggaccagggaaatgcttccgcgtctacccagaagaccaattt
gggaaacttgaggattcgacaaaggcagagatcaagcgatgcaacctctctaatgtcatt
ttgcaacttaaggcactgggtgttgatgatatcactgggtttgacttcatagaaaaaccg
tcaaggtcggctattgtcaaatcactggagcaattgttcgtactgggtgctttgacagat
gactgcaaattgtcaaatccagttggaatccaaatggctcgccttcccttagaccctgtt
tattcaagggctctaattgtagcaagtgaattcaattgcctggaagagatgttgataagt
gttgcagtgctctctgtggaatcaatatcttttaatccccgtgacaaaatagaagaggtg
agaactgcacagaaatcctttgcaagtccagagggagaccacctcactttggttaatgta
tatcgagcatccaatgagttcttggacaagagatcaggtctttgtaaagagaagcgtgaa
aaagctttctggaaatggtgcaaggataatttcattcatagtcgctccttgacaaatgct
cgtgacattcacagacaaattcaaggacatgttgaacaaatgggtcttcgtatcacctct
tgtggggatgatgtgcttcagttttgcagatgtcttgccacttctttcttcctcaatgca
gccnntgatggaacatacagggctttagcaaaaggtgaggtggtttctatccacccatct
tccgtaataaggaatagaccagagtgcctagtttacaacgaactggtcgaaactagtaga
aaattcatccgcaacacaactagaatcgactttttgtggctaactgagcttgctcctcaa
ttctatgccatgcagaactga

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