KEGG   Pyrus x bretschneideri (Chinese white pear): 103952138
Entry
103952138         CDS       T03446                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 1
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
pxb  Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pxb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103952138
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pxb03021]
    103952138
Enzymes [BR:pxb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     103952138
Transcription machinery [BR:pxb03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     103952138
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_5
Other DBs
NCBI-GeneID: 103952138
NCBI-ProteinID: XP_009361958
Position
Unknown
AA seq 1960 aa
MEEASTSNILDGEIVGIKFGLATHQEICTASISDCSISHASQLSNPFLGLPLEFGKCESC
GTSEPGKCEGHFGYIELPVPIFHPNHVSELKRMLSLLCLKCLKMKKNKFPTKNAGLAERM
LASCCEDAAQVSIGETKPTDSSCSLQLKRPSKSRTPPGFWNFLERYGFRYGDDHIRTLLP
CEVLEMLKRIPQDTRKKLASKGYFPQDGYILRHIPVPPNCLSVPEISDGVSVMSADPSIS
MLRKVLKQIEVIRSSRSGIPNFESQIVEANELQAIVDQYLQVRGTGKASRDIDARLGVNR
ELNASSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEVGIPYEIAQRITFEEKVND
HNIRYLQQLVDKKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRILDGDLVFVNRPPT
THKHSLQALQVYVHDDHVVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVEK
QLLSSHSGKPNLQMATDSLLSLKMMFKNYFLDKSAAQQLAMFASSSLPRPALLKANAARS
YWTALQILQTALPAHFDYCGEKYLVNKSEILKIDFSTSEVSAVMNDVATSVFFEKGGEDV
LKFFDSLQPLLMENIFSEGFSVGLEDFYMSKTSIQDIQKNIQDTSDLLYHLRSTYNEFVE
FQLESRIKNLKVPVSCFILESSAFGDLIDSKSDSAINKVVQQIGFLGLQLSDKGRFYSKT
LVEDVASLYHNKYSFNMEYPSAEYGLVQSCFFHGLDPYEEIVHSIATREVIVRSSRGLTE
PGTLFKNLMAILRDVVICYDGTVRNVCSNSVIQFEYGVNSGSRPPNLFPAGEPVGVLAAT
AMSNPAYKAVLDSTPSSNSSWELMKEILLCKVNFKNELIDRRVILYLSNCGCGRTFCRER
AACLVKNQLKKVSLKDTAVEFMIEYSNQLSSLGSMVNEAGLVGHIHLNEELLRELNVGVD
EIQQKCQETVNSFRRKRVGKKKFNIGYLFKNTVLFASEHCSFHHSCADKRSDSPCLMFFL
QATEELETTSQYYADLICPVLLETIIKGDPRISSANIIWIDPDTTTWIRSPNKSQKGEWA
LDVVLEKSVVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGVSCAFDQAVQR
LATAVTMVAKGVLKEHLILLANSMTCAGNFVGFNSSGYKALSRALNIQVPFTEATLFTPR
KCFERAAEKCHMDSLSSIVASCSWGKHVAVGTGSRFDILWDTREGGLNQEGGLDVFNFLH
MVSTANGEEATTGALGAEVDDLMVVDELADSCLSPELDSGLDRPVFEDIIEFEDKSETPP
GKSSWENDSSVWGTNSTREDATSSWGKTPAREATTTTWGIDKAAEDTTPAWGTNTAREDA
TSAWGKTREHITSAGGADKTSENDTSSWGKTLAKEPAASSWGIAKAAEDTPPAWGTNTAR
EDAAKTGEPPTSAWGASKVSQNDTPSWGKTPAKETSTSTWGIDKAAEDTTPVWGTSTARE
DATPAWGKSREKTASAWGTDKESDNDTSSWGKNPARKPTTSTWGIDKAAEDTTPAWGTST
AREDATPAWGKSRENTASAWGTDKESENDRSSWGKTPARKPTNSTWGTEKAAEDTTPTSG
TNTAREDATSTWGKTGEHTTSTWGTDKASENDWSGRGAEKVAPIDLPPTTKDVDEKDNGW
GAVSCGETETGNENAWEQNKSSEISTGSWGQKNPPETETQPASLSGWDSPTGDGNTGERH
HQWGQNKKSRFEGSKSWVSSPGEWKNKNRPAKPPGMMNDNSSVVGLYTATRQRLDMFPSE
EQDVLSNIEPIMRSIRRIMHQSGYNDGDPLSADDQSFIIDNVLNYHPDKAVKMGSGIGHL
TVDRHGSFQDSRCFFVVTTDGHKEDFSYRKCLENYIKEKYADVAETFIGKYFTRRGGNRE
RNPTPSQYPIPQQTPSQTPIAEETVSQTPISEQTGNEETQ
NT seq 5883 nt   +upstreamnt  +downstreamnt
atggaggaggcctcgacctcaaatattttagatggggaaatcgttggaatcaaatttggt
ttagcaactcatcaagaaatttgtacagcatctattagtgattgctctatcagccatgca
agtcaactttccaaccccttccttggcctgccccttgagttcggaaagtgtgaatcttgt
ggcacttctgaacctgggaagtgtgaaggtcattttgggtatattgagttaccagtacca
atatttcatcctaatcatgttagtgaattgaagcggatgctgagcttattgtgcttgaaa
tgcttgaaaatgaaaaagaacaagtttccaaccaagaacgctggcttagcagaaagaatg
ttagcttcatgttgtgaggatgctgcacaagtgtctattggagagactaaaccaacagat
agctcttgttccttgcaattgaagcgaccttctaagtcaagaacaccacctggtttttgg
aatttcctagaacgatatggttttcgttatggtgatgatcatatacggactttgctccct
tgtgaggtgctggagatgctaaagcgaatccctcaagacaccaggaagaaacttgcttca
aaaggctattttcctcaagatggatacatcttgcgtcatatacctgtccctccaaactgt
ttatcggtacctgagatttcagatggtgttagtgttatgtccgcggatccttcgatttca
atgcttagaaaagttctaaagcaaattgaagtcatcagaagttcaaggtcgggcatacct
aattttgaatcccaaattgtagaagccaatgaacttcaagcaattgtagatcagtatctt
caagttaggggtactgggaaggcatcacgggacattgatgcgagattaggggttaatagg
gagcttaatgcctcttcaacgaaagcttggcttgaaaaaatgaggacactgttcatcaga
aagggttcaggcttctcttcccgctcagtgattacgggggatgcatataaaagggtgaat
gaagttggcatcccttatgaaattgctcaaagaatcacctttgaggagaaggttaatgac
cataacattaggtacctacaacagctagtagataagaagttatgcctaacctatagggat
ggttcatcaacttactcattaagggaaggttccaaagggcacacatttttgaggcctggt
caagtggtgcatcggaggattctggacggggaccttgtattcgtaaacaggcccccaact
acacacaaacattcgctacaagcactacaagtgtatgtgcatgatgaccatgtggtgaaa
ataaatcctttgatatgtgggccactaagtgctgactttgatggtgattgcatccatttg
ttctatccgcaatcgcttgctgcaaaggcagaagttttggagcttttttcagtggagaag
cagctgcttagctctcatagtggaaagccaaatttgcaaatggccactgattcactgttg
tcattgaagatgatgtttaaaaactattttttggataaatcagcagctcaacaactggcc
atgtttgcttcatcttcgttgccacgacctgcattattgaaagcaaatgctgctcgctca
tattggactgctttgcagatattacagactgcattgcctgctcactttgattactgtggg
gaaaagtacttagtcaataaaagtgagatactgaaaattgatttcagtacaagtgaagtt
tcggcagtgatgaatgatgttgctacctcagttttcttcgagaaaggtggcgaagatgtc
ctcaaattcttcgattctctacagcccttgctgatggagaacatattttcagaagggttc
agtgttggcttggaagatttttacatgtcaaagacatcaatacaagatattcagaagaat
attcaggatacttcagatttgttgtatcatctgaggtcaacctacaatgaatttgtagag
tttcagttagagagtcgaatcaaaaacttgaaagtaccagtttcatgttttatcttggag
tcatctgcatttggtgatttaatcgactccaagagtgattcggcaatcaacaaagttgta
caacaaattgggttcctaggcctacaactctcagataagggaagattctactcgaagact
ttggttgaggatgtggcctctctctatcacaacaagtattcttttaacatggagtatccc
tctgcagaatatggactagttcaaagctgtttcttccatgggttagatccatacgaggag
atagttcactccattgctacacgagaggtgattgttcggtcctcaagaggattgaccgaa
cctgggaccttatttaaaaatttaatggccattcttcgggatgtggttatttgctatgat
ggcacggtcagaaatgtatgtagcaattcagtaatccaatttgagtatggagtcaactct
ggatctaggcccccgaatctgttccctgctggtgaacctgttggcgtgttagctgccact
gcaatgtcaaatcctgcgtacaaggcagttcttgattctaccccaagcagcaattcttca
tgggagctgatgaaggaaattttgctttgcaaagtcaattttaagaacgagctcattgat
cgccgtgtaattttgtacttgagtaactgtggttgtggtagaacattctgccgagaacgt
gcagcatgtttggttaagaatcagttgaagaaagtcagtcttaaagatactgcagttgaa
ttcatgattgaatatagcaatcagctttctagtttgggaagtatggtaaatgaagcaggc
ctagttggtcatattcatctgaacgaggagctgttaagggagttaaatgttggtgtagac
gagattcaacaaaaatgccaagaaactgttaattcatttcggaggaagagagttgggaag
aaaaagttcaacattggctatcttttcaaaaatacagttttgtttgccagtgagcattgt
tcttttcatcattcctgtgcagacaaaagatctgactccccatgcttgatgttcttcctt
caagctactgaagagttggagaccacttcgcaatactatgctgacttgatttgccctgtg
cttttagaaacaataataaaaggtgaccctcgaatttcgtcagcaaatataatatggatt
gatccagatacaacaacttggattagaagcccaaataaatctcaaaagggtgaatgggcc
ttggatgttgttctggagaaatctgttgtcaagcaaagcggtgatgcatggagaatcgtt
ctcgattcttgcctccctgtgcttcacctaattgacaccaggcgttccatcccgtatgcc
atcaaacagattcaagagctgttgggagtgtcgtgtgcttttgatcaagcagttcagcgc
ctcgcaacagctgttacaatggtggcgaaaggtgtcctgaaagagcatcttatcctcctg
gcaaatagcatgacatgtgctggaaattttgttggctttaattctagtggatataaagca
ctatctcgtgcattgaatattcaagtaccatttacagaagcaacactttttacaccaaga
aagtgctttgagagagcagctgaaaagtgccacatggattcgttgtcaagcatagttgca
tcatgttcatggggtaaacatgttgctgttggtactggatccaggtttgatatcctgtgg
gacacacgagagggaggattgaatcaagagggtgggttagatgttttcaactttctgcat
atggtgagcacagcaaatggagaagaagcaactacgggagcactgggggcagaagttgac
gatcttatggtggtagatgaattagcagattcgtgcttgtcgccagaacttgactctggt
ctagataggcccgtctttgaagatattattgaatttgaggacaaatcagaaactcctcct
ggaaagtcaagttgggaaaatgattcctctgtatgggggacaaatagtacaagagaagat
gccacatcatcttgggggaaaactccagctagagaagctaccacaactacttgggggata
gataaggcagcagaagataccactcctgcatgggggacaaatactgccagggaagatgcg
acatctgcctgggggaaaactagagagcatatcacttctgcagggggcgcagataagaca
agtgaaaatgatacatcatcgtggggtaaaactctagctaaagaacctgccgcatcttct
tgggggatagccaaggcagcagaagatacccctccagcatgggggacaaatactgccaga
gaagatgccgcgaaaaccggagaacctcccacttctgcctggggggcaagtaaggtaagt
caaaatgatacaccatcttgggggaaaactccagctaaagaaacttcgacatccacttgg
gggatagataaggcagcagaagataccactcctgtatgggggacaagtactgccagagaa
gatgccacacctgcctgggggaaatctagagaaaagactgcttctgcctggggaacagat
aaggaaagtgataatgatacatcatcttgggggaaaaatccagctagaaaacctaccacc
tctacttggggtatagataaggcagcagaagataccactcctgcgtggggaacaagtact
gccagagaagatgccacaccagcttgggggaaatctagagaaaatactgcttctgcctgg
ggaacagataaggaaagtgaaaatgatagatcatcttgggggaaaactccagctagaaaa
cctaccaactctacttgggggacagagaaggcagcagaagataccactccgacatcgggg
acaaatactgccagagaagatgccacatctacctgggggaaaactggagaacataccact
tctacctgggggacagataaggcaagtgaaaatgattggagtggtagaggggcagagaaa
gtcgcaccaatagacctcccaccgacaacaaaagacgtagatgaaaaggacaatggatgg
ggtgctgtttcttgtggggaaacagaaacagggaatgaaaatgcttgggaacagaataag
tcttccgaaatttcaactggttcttgggggcagaaaaatcctcccgagacagaaactcaa
cctgcaagcttgtctgggtgggattcacctactggagatggtaatactggtgaaagacat
caccaatggggacaaaacaagaaaagtcgttttgaaggttcaaagagttgggtttctagt
cccggggagtggaagaataagaaccgtcctgctaaaccacctggtatgatgaatgataat
tccagtgtggttggactctatactgcaacaagacaaagattggatatgttccctagcgag
gagcaagatgttctttctaatattgaacctattatgcgctctatccgaagaataatgcat
caatctgggtacaatgatggggatccactgtcagctgatgaccagtcatttataattgat
aatgttctcaattaccacccggataaagctgttaaaatgggttctggaattggccatctc
acagttgataggcacggcagtttccaggacagcagatgcttttttgttgtgacaacagat
ggtcacaaggaagatttttcgtatagaaaatgcctggagaattacattaaggaaaagtat
gctgatgttgccgaaacattcataggcaagtattttaccaggagaggagggaatcgggag
cgaaaccccactccaagtcaataccccattccacaacagactccaagccaaactcccatt
gcagaggaaactgtaagtcaaacccccatttcggagcaaactgggaacgaggagacgcag
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system