KEGG   Pyrus x bretschneideri (Chinese white pear): 103962022
Entry
103962022         CDS       T03446                                 
Name
(RefSeq) exosome complex component RRP41-like
  KO
K12587  exosome complex component MTR3
Organism
pxb  Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pxb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103962022
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pxb03019]
    103962022
Messenger RNA biogenesis [BR:pxb03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     103962022
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 103962022
NCBI-ProteinID: XP_009372960
Position
Unknown
AA seq 258 aa
MAGKGGATPSTYAPSPTTQKTKSLIFGNDDVDWVRSDGREFHQCRPAFFKTGAVNCASGS
AYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCDVGYTTFATPVRGQGSDHKEFSSMLH
KALEGAIILETFPKTTVDVFALVLESGGSDFPVIISCASLALADAGIMMYDLVASVSVSC
LGKNLVIDPILEEESYQDGSLMLTCMPSRYEVTQLTITGEWSTPKVNEGMQICLDACAKL
AVIMRACLKGTNSTLEET
NT seq 777 nt   +upstreamnt  +downstreamnt
atggccgggaaaggaggagcaaccccaagcacttacgcgccgtctccgacgacccagaag
accaaatccctaattttcggaaacgacgacgttgattgggtccgctccgacggccgtgaa
ttccaccaatgccgacctgcatttttcaagaccggtgctgtaaattgtgcttcaggatca
gcttatgcagagtttggaaataccaaggtcattgtttctgtatttgggccaagagagagt
aagaaggcaatgatgtacagtgatataggacgcttaaattgcgatgtcggctatacaact
tttgctaccccagttcgtggacaggggtcggaccacaaagaattttcttcaatgcttcat
aaagctttagagggtgcaataatattggaaactttccccaagactactgtggatgttttt
gcattggtgttggaatctggaggcagtgattttcctgtaatcatatcatgtgctagcctt
gccctagcagatgccgggataatgatgtatgaccttgttgcttcggtttctgtgtcttgt
ctcggaaagaaccttgtcatcgatcctattttggaggaggaaagctaccaagatggaagc
ttaatgctgacttgtatgccttctcgctacgaggtcactcaactaactattactggggaa
tggtcaaccccaaaagttaatgagggaatgcaaatatgcctggatgcctgcgcaaagctt
gcggtgatcatgagggcatgcttgaaagggactaattcgaccttggaagaaacatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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